RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OR1A2Q9Y585 309 aa15.38■□□□□ 0.05
VTI1A-203ENST00000472892 LOC400499M0QZD8 3231 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 RECQL5O94762 991 aaPredicted RBP15.37■□□□□ 0.05
VTI1A-203ENST00000472892 RASGRP1O95267 797 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 SERPING1P05155 500 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 MPOP05164 745 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 CELA2BP08218 269 aaPredicted RBP15.37■□□□□ 0.05
VTI1A-203ENST00000472892 CR2P20023 1033 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 ARL4AP40617 200 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 SRP54P61011 504 aaKnown RBP15.37■□□□□ 0.05
VTI1A-203ENST00000472892 SMTNL2Q2TAL5 461 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 PERM1Q5SV97 790 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 ESRP1Q6NXG1 681 aaKnown RBP15.37■□□□□ 0.05
VTI1A-203ENST00000472892 DPPA4Q7L190 304 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 LUZP1Q86V48 1076 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 NIPA2Q8N8Q9 360 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 PLA2G15Q8NCC3 412 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 ATL2Q8NHH9 583 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 TEKT4Q8WW24 435 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 NAT6Q93015 286 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 CSPG4P5Q96PW8 444 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.05
VTI1A-203ENST00000472892 THAP2Q9H0W7 228 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 PRORYQ9H606 182 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 POLR1BQ9H9Y6 1135 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 PADI4Q9UM07 663 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 CAPN11Q9UMQ6 739 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 DGKBQ9Y6T7 804 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 IGSF10Q6WRI0 2623 aa15.37■□□□□ 0.05
VTI1A-203ENST00000472892 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 A0A1W2PQ67 120 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 SYCE3A1L190 88 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 TTC24A2A3L6 582 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 HTRA2O43464 458 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 MAFKO60675 156 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 TCEA3O75764 348 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 PCCBP05166 539 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 CYP1A2P05177 515 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 HOXC4P09017 264 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 ALPIP09923 528 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 CTSEP14091 401 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 GM2AP17900 193 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 TRIM23P36406 574 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 HSPA9P38646 679 aaKnown RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 UBASH3AP57075 661 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 TPM4P67936 248 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 GABREP78334 506 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 ZBED6P86452 979 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 COL9A2Q14055 689 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 TDRD12Q587J7 1177 aaKnown RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 TMCO3Q6UWJ1 677 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 NYAP1Q6ZVC0 841 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 RD3Q7Z3Z2 195 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 WDR48Q8TAF3 677 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 CPLX3Q8WVH0 158 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 SCG3Q8WXD2 468 aaKnown RBP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 HSPH1Q92598 858 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 IQCDQ96DY2 449 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 HIC2Q96JB3 615 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 WDR92Q96MX6 357 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.36■□□□□ 0.05
VTI1A-203ENST00000472892 IP6K2Q9UHH9 426 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 RAI2Q9Y5P3 530 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 ASXL3Q9C0F0 2248 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 ATRXP46100 2492 aa15.36■□□□□ 0.05
VTI1A-203ENST00000472892 LRRK1Q38SD2 2015 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 A0A087X0T9 212 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 TNFP01375 233 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 ELFN1P0C7U0 828 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 FAM228BP0C875 321 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 IL4RP24394 825 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 KIAA1024LP59773 190 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 ERVPABLB-1P60509 514 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 SLC25A11Q02978 314 aaKnown RBP15.35■□□□□ 0.05
VTI1A-203ENST00000472892 KCTD16Q68DU8 428 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 IGF2-ASQ6U949 168 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 CRTC1Q6UUV9 634 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 RBM44Q6ZP01 1051 aaKnown RBP15.35■□□□□ 0.05
VTI1A-203ENST00000472892 GKN2Q86XP6 184 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 CBARPQ8N350 705 aaPredicted RBP15.35■□□□□ 0.05
VTI1A-203ENST00000472892 PGBD5Q8N414 524 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 ARL10Q8N8L6 244 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 FAM71BQ8TC56 605 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 FUBP1Q96AE4 644 aaKnown RBP15.35■□□□□ 0.05
VTI1A-203ENST00000472892 BTBD6Q96KE9 485 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 BBC3Q96PG8 261 aaPredicted RBP15.35■□□□□ 0.05
VTI1A-203ENST00000472892 NUDCD1Q96RS6 583 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 RBM15Q96T37 977 aaKnown RBP eCLIP15.35■□□□□ 0.05
VTI1A-203ENST00000472892 CCDC3Q9BQI4 270 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 NUP85Q9BW27 656 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 PCDH18Q9HCL0 1135 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 GULP1Q9UBP9 304 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 KLQ9UEF7 1012 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 DOLKQ9UPQ8 538 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 PCDHGC4Q9Y5F7 938 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 ENTPD2Q9Y5L3 495 aa15.35■□□□□ 0.05
VTI1A-203ENST00000472892 SMG1Q96Q15 3661 aaKnown RBP15.34■□□□□ 0.05
VTI1A-203ENST00000472892 A0A1W2PNU3 283 aaPredicted RBP15.34■□□□□ 0.05
VTI1A-203ENST00000472892 TMEM202A6NGA9 273 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms