RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 HID1Q8IV36 788 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 MLKLQ8NB16 471 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 TP53I13Q8NBR0 393 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 HCAR2Q8TDS4 363 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 NANOS1Q8WY41 292 aaKnown RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 CMKLR1Q99788 373 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 WRAP53Q9BUR4 548 aaKnown RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 CPEB1Q9BZB8 566 aaKnown RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 TTYH3Q9C0H2 523 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 TCEAL2Q9H3H9 227 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 SIX2Q9NPC8 291 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 METTL5Q9NRN9 209 aaKnown RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 DONSONQ9NYP3 566 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 SIRPGQ9P1W8 387 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 PISDQ9UG56 409 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 DNAI1Q9UI46 699 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 GGT7Q9UJ14 662 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 TMEM59LQ9UK28 342 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 MFHAS1Q9Y4C4 1052 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 LOXL2Q9Y4K0 774 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 COL27A1Q8IZC6 1860 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 KIF26BQ2KJY2 2108 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 CACNB4O00305 520 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-211ENST00000471455 TMCC1O94876 653 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 CD160O95971 181 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 TNFP01375 233 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 PNMA6AP0CW24 399 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-211ENST00000471455 PNLIPP16233 465 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 PTPN9P43378 593 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 MTM1Q13496 603 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 CDO1Q16878 200 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 PARP15Q460N3 678 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 TMEM52BQ4KMG9 183 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 ATXN7L2Q5T6C5 722 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-211ENST00000471455 TMEM164Q5U3C3 297 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 TAF3Q5VWG9 929 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 NAA35Q5VZE5 725 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 ENPP7Q6UWV6 458 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 TRIM72Q6ZMU5 477 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 NLRP14Q86W24 1093 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 DNAAF5Q86Y56 855 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 CCNJLQ8IV13 435 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 WDR92Q96MX6 357 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 B3GNT4Q9C0J1 378 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 CLPBQ9H078 707 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 NDST4Q9H3R1 872 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 LRRN3Q9H3W5 708 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 CAAP1Q9H8G2 361 aa9.2□□□□□ -0.94
CPSF4-211ENST00000471455 CHD5Q8TDI0 1954 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 ATMQ13315 3056 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 PMS2P1A4D2B8 440 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 ANKRD62A6NC57 917 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 PES1O00541 588 aaKnown RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 EFSO43281 561 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 PPFIA2O75334 1257 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 LRIG2O94898 1065 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 PLEKP08567 350 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 GLB1P16278 677 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 YBEYP58557 167 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 KIAA1024LP59773 190 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 SRP54P61011 504 aaKnown RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 NOMO3P69849 1222 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 CCL7P80098 99 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 PEX6Q13608 980 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 ARHGEF7Q14155 803 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 CLPPQ16740 277 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 ALG11Q2TAA5 492 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 VWA3BQ502W6 1294 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 EFHC2Q5JST6 749 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 LRRC73Q5JTD7 316 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 CERCAMQ5T4B2 595 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 BRAT1Q6PJG6 821 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 RD3Q7Z3Z2 195 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 B3GNT8Q7Z7M8 397 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 EMC1Q8N766 993 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 PAF1Q8N7H5 531 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 RTL3Q8N8U3 475 aaKnown RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 CCDC112Q8NEF3 446 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 KIAA1524Q8TCG1 905 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 RXFP2Q8WXD0 754 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 CPA5Q8WXQ8 436 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 NTAN1Q96AB6 310 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 HMCESQ96FZ2 354 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 ZNF641Q96N77 438 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 RBM15Q96T37 977 aaKnown RBP eCLIP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 SEMA3CQ99985 751 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 APOOQ9BUR5 198 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 STK33Q9BYT3 514 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 FOXP3Q9BZS1 431 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 CATSPERBQ9H7T0 1116 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 MBNL1Q9NR56 388 aaKnown RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 STARD5Q9NSY2 213 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 IL17BQ9UHF5 180 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 AJAP1Q9UKB5 411 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-211ENST00000471455 APPL1Q9UKG1 709 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 FHOD1Q9Y613 1164 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 ACTL7AQ9Y615 435 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 DGKBQ9Y6T7 804 aa9.19□□□□□ -0.94
CPSF4-211ENST00000471455 A0A1W2PQC6 194 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms