RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 MARCH9Q86YJ5 346 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 TMTC1Q8IUR5 882 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 ATL2Q8NHH9 583 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 UBXN4Q92575 508 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 HSPH1Q92598 858 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 GLMNQ92990 594 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 CSPG4P5Q96PW8 444 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 IL12RB2Q99665 862 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 NUP85Q9BW27 656 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 SLC13A1Q9BZW2 595 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 SCUBE2Q9NQ36 999 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 MBNL1Q9NR56 388 aaKnown RBP13.59□□□□□ -0.23
HMGN1-211ENST00000471260 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
HMGN1-211ENST00000471260 KLF15Q9UIH9 416 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 GPSM3Q9Y4H4 160 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 FREM2Q5SZK8 3169 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 URB1O60287 2271 aaKnown RBP13.59□□□□□ -0.23
HMGN1-211ENST00000471260 DMXL2Q8TDJ6 3036 aa13.58□□□□□ -0.23
HMGN1-211ENST00000471260 APC2O95996 2303 aa13.58□□□□□ -0.23
HMGN1-211ENST00000471260 FAM208BQ5VWN6 2430 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 TRAFD1O14545 582 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-211ENST00000471260 LZTS3O60299 673 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-211ENST00000471260 MAFKO60675 156 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 SOCS5O75159 536 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 MT-CO3P00414 261 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 AMPD1P23109 780 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 CASP14P31944 242 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 LIG3P49916 1009 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 SCNN1BP51168 640 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 CDH6P55285 790 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 SLC25A11Q02978 314 aaKnown RBP13.58□□□□□ -0.24
HMGN1-211ENST00000471260 MTM1Q13496 603 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 IRF4Q15306 451 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 SMTNL2Q2TAL5 461 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 WSCD2Q2TBF2 565 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 TPRG1LQ5T0D9 272 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 CCDC122Q5T0U0 273 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 FBXO38Q6PIJ6 1188 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 ARHGAP36Q6ZRI8 547 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 PHACTR4Q8IZ21 702 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 FSTL5Q8N475 847 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-211ENST00000471260 TPCN2Q8NHX9 752 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 FAM71BQ8TC56 605 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 LMX1AQ8TE12 382 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 NSMCE1Q8WV22 266 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 KCTD5Q9NXV2 234 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 UVRAGQ9P2Y5 699 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 APOBEC3BQ9UH17 382 aaKnown RBP13.58□□□□□ -0.24
HMGN1-211ENST00000471260 MRFAP1Q9Y605 127 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 LAMA5O15230 3695 aa13.58□□□□□ -0.24
HMGN1-211ENST00000471260 A0A087WV48 116 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 LY6G6EA0A0G2JKS1 128 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 EME2A4GXA9 379 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-211ENST00000471260 LMO7DNF2Z398 122 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 HTRA2O43464 458 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-211ENST00000471260 OPA1O60313 960 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 NEBLO76041 1014 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 TUBBP07437 444 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 TCF4P15884 667 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 CR2P20023 1033 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 RPIAP49247 311 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 ZNF235Q14590 738 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 PRRT3Q5FWE3 981 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 FAXCQ5TGI0 409 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 CDCP2Q5VXM1 449 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 LVRNQ6Q4G3 990 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 ZSWIM9Q86XI8 627 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 PAF1Q8N7H5 531 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 GRAMD1AQ96CP6 724 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 NUDCD1Q96RS6 583 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 APOOQ9BUR5 198 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 BOCQ9BWV1 1114 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 ABCG4Q9H172 646 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 PCDH18Q9HCL0 1135 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 NENFQ9UMX5 172 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 LHX6Q9UPM6 363 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 RAXQ9Y2V3 346 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 U3KQA8 63 aa13.57□□□□□ -0.24
HMGN1-211ENST00000471260 PKD1L2Q7Z442 2459 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 SSU72P8A0A1W2PR75 194 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 MUSKO15146 869 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 KIF5CO60282 957 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 PEX11BO96011 259 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ANXA6P08133 673 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 HOXC4P09017 264 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ALPIP09923 528 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 H2AFZP0C0S5 128 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ELFN1P0C7U0 828 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 HK3P52790 923 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 KRT81Q14533 505 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 INPP5AQ14642 412 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 NFATC4Q14934 902 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ELOCQ15369 112 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 NR0B2Q15466 257 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 SLC18A3Q16572 532 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 C6orf132Q5T0Z8 1188 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 MARC1Q5VT66 337 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 LIPIQ6XZB0 460 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ZNF662Q6ZS27 426 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms