RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 VAC14Q08AM6 782 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ATMQ13315 3056 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PDE1CQ14123 709 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 CDKN3Q16667 212 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 BOLA3Q53S33 107 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 CARD16Q5EG05 197 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 C3orf38Q5JPI3 329 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 DNTTIP2Q5QJE6 756 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 TPRG1LQ5T0D9 272 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 GUSBP11Q6P575 273 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 RBM44Q6ZP01 1051 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PARS2Q7L3T8 475 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 CPNE8Q86YQ8 564 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PLPP6Q8IY26 295 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ARFGAP1Q8N6T3 406 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 WDR48Q8TAF3 677 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 TEKT4Q8WW24 435 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF592Q92610 1267 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 RAB7BQ96AH8 199 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ISG20Q96AZ6 181 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 CCDC97Q96F63 343 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PRR11Q96HE9 360 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 TBATAQ96M53 351 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 HAPLN3Q96S86 360 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 BOCQ9BWV1 1114 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ZYG11BQ9C0D3 744 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 OSBPL2Q9H1P3 480 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 CARD9Q9H257 536 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ATP13A1Q9HD20 1204 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 DDX56Q9NY93 547 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 SNX12Q9UMY4 172 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 SATB2Q9UPW6 733 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ENTPD2Q9Y5L3 495 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 SNX10Q9Y5X0 201 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 COL6A6A6NMZ7 2263 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 B8ZZF3 427 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 K7ENP7 123 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 CES2O00748 559 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 FANCGO15287 622 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 DDX3YO15523 660 aaKnown RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 SPINT1O43278 529 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 CD160O95971 181 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 C6P13671 934 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 JUNDP17535 347 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 RBMS1P29558 406 aaKnown RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 ABL2P42684 1182 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 PDX1P52945 283 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 RWDD2BP57060 319 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 GNA12Q03113 381 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 SGCGQ13326 291 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 TUBB2AQ13885 445 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 NR0B2Q15466 257 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 DEFB133Q30KQ1 61 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 ARL13BQ3SXY8 428 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 SCYL2Q6P3W7 929 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 INO80CQ6PI98 192 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 EFL1Q7Z2Z2 1120 aaKnown RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 CLEC14AQ86T13 490 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 KATNAL2Q8IYT4 538 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 BTN2A2Q8WVV5 523 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 KRT35Q92764 455 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 NAT6Q93015 286 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 NTAN1Q96AB6 310 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 VOPP1Q96AW1 172 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 ATXN7L3BQ96GX2 97 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 IL12RB2Q99665 862 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 TUBB2BQ9BVA1 445 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 SEMA4CQ9C0C4 833 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 TMPRSS4Q9NRS4 437 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 PPARGC1AQ9UBK2 798 aaKnown RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 SPASTQ9UBP0 616 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 IPO11Q9UI26 975 aaKnown RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 PACSIN2Q9UNF0 486 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-206ENST00000471037 SAR1BQ9Y6B6 198 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 TRPM6Q9BX84 2022 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 TENM4Q6N022 2769 aa9.17□□□□□ -0.94
SF3A1-206ENST00000471037 DOCK4Q8N1I0 1966 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 CPED1A4D0V7 1026 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 IGLON5A6NGN9 336 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 C16orf96A6NNT2 1141 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 LMO7DNF2Z398 122 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 AREL1O15033 823 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 SRGAP2O75044 1071 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 GSRP00390 522 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 KRT1P04264 644 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ITGA2BP08514 1039 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 IL1R2P27930 398 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ETFBP38117 255 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 CETN2P41208 172 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 MARCKSL1P49006 195 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 RPIAP49247 311 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 PEX5P50542 639 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 DNA2P51530 1060 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 GEMIN4P57678 1058 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 YPEL5P62699 121 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 NRG1Q02297 640 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 LY6DQ14210 128 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms