RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 XRCC4Q13426 336 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 SLC12A1Q13621 1099 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 ELAVL3Q14576 367 aaKnown RBP13.78□□□□□ -0.2
LINC00173-201ENST00000470091 PRKD1Q15139 912 aaPredicted RBP13.78□□□□□ -0.2
LINC00173-201ENST00000470091 INAVAQ3KP66 663 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 MAP9Q49MG5 647 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 ZDHHC24Q6UX98 284 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 LRRC31Q6UY01 552 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 EID2Q8N6I1 236 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 SNF8Q96H20 258 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 CELF6Q96J87 481 aaKnown RBP13.78□□□□□ -0.2
LINC00173-201ENST00000470091 KLC2Q9H0B6 622 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 SARDHQ9UL12 918 aa13.78□□□□□ -0.2
LINC00173-201ENST00000470091 IGLV3-10A0A075B6K4 115 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 A0A1B0GVM2 712 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 CFAP69A5D8W1 941 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 TCAF2A6NFQ2 919 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 PPP1R12AO14974 1030 aaPredicted RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 CNTN5O94779 1100 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 FAM153BP0C7A2 387 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 RPL22P35268 128 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 DRD3P35462 400 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ADCY8P40145 1251 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 DRG2P55039 364 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 SULT2A1Q06520 285 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 GPS1Q13098 491 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 MTA1Q13330 715 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 PDK1Q15118 436 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 SHBQ15464 509 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 DLG2Q15700 870 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 P3H1Q32P28 736 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 FAM153CQ494X1 144 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ALFQ53S48 1182 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 IZUMO3Q5VZ72 239 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 CXorf57Q6NSI4 855 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 BZW1Q7L1Q6 419 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 TFAP2DQ7Z6R9 452 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 PRPF39Q86UA1 669 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 NLRP14Q86W24 1093 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ARHGAP12Q8IWW6 846 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 TAB3Q8N5C8 712 aaPredicted RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 RTL3Q8N8U3 475 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 OR52K2Q8NGK3 314 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 CCHCR1Q8TD31 782 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 FRS2Q8WU20 508 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 TFB1MQ8WVM0 346 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 CNDP2Q96KP4 475 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 GDAP1L1Q96MZ0 367 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 LGMNQ99538 433 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 FEM1AQ9BSK4 669 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ZYG11BQ9C0D3 744 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 USP29Q9HBJ7 922 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ARFGAP3Q9NP61 516 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ZDHHC18Q9NUE0 388 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 PPARGC1AQ9UBK2 798 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 FAM153AQ9UHL3 310 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 SLC25A13Q9UJS0 675 aa13.77□□□□□ -0.21
LINC00173-201ENST00000470091 SMG1Q96Q15 3661 aaKnown RBP13.77□□□□□ -0.21
LINC00173-201ENST00000470091 ADAMTS20P59510 1910 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 WASH4PA8MWX3 477 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 JUPP14923 745 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 RHOQP17081 205 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 PLK1P53350 603 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 ITGA8P53708 1063 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 PLTPP55058 493 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 GALNT2Q10471 571 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 AP1B1Q10567 949 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 CNTN1Q12860 1018 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 SMAD1Q15797 465 aaKnown RBP13.76□□□□□ -0.21
LINC00173-201ENST00000470091 Q6ZVU0 165 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 DSG4Q86SJ6 1040 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
LINC00173-201ENST00000470091 EIF1ADQ8N9N8 165 aaKnown RBP13.76□□□□□ -0.21
LINC00173-201ENST00000470091 FBXO25Q8TCJ0 367 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 SAP25Q8TEE9 199 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 KLK6Q92876 244 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 RTP4Q96DX8 246 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 ALG14Q96F25 216 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 NDFIP2Q9NV92 336 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 ZNF446Q9NWS9 450 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 SEPT10Q9P0V9 454 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 WHRNQ9P202 907 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 VPS28Q9UK41 221 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 CA5BQ9Y2D0 317 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 PLXNA2O75051 1894 aa13.76□□□□□ -0.21
LINC00173-201ENST00000470091 DRGXA6NNA5 263 aa13.75□□□□□ -0.21
LINC00173-201ENST00000470091 DFFAO00273 331 aa13.75□□□□□ -0.21
LINC00173-201ENST00000470091 DNALI1O14645 258 aaPredicted RBP13.75□□□□□ -0.21
LINC00173-201ENST00000470091 MT-CO1P00395 513 aa13.75□□□□□ -0.21
LINC00173-201ENST00000470091 ARRB1P49407 418 aaPredicted RBP13.75□□□□□ -0.21
LINC00173-201ENST00000470091 OXCT1P55809 520 aa13.75□□□□□ -0.21
LINC00173-201ENST00000470091 NXPH1P58417 271 aa13.75□□□□□ -0.21
LINC00173-201ENST00000470091 CALCOCO2Q13137 446 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms