RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 FAXCQ5TGI0 409 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 LIPIQ6XZB0 460 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 NYAP1Q6ZVC0 841 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 EFL1Q7Z2Z2 1120 aaKnown RBP16.39■□□□□ 0.21
COL9A3-208ENST00000469802 PGBD5Q8N414 524 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 FAM71BQ8TC56 605 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 MAPK15Q8TD08 544 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 HSPH1Q92598 858 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 CRELD1Q96HD1 420 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 BTBD6Q96KE9 485 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 MGME1Q9BQP7 344 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL9A3-208ENST00000469802 APOOQ9BUR5 198 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 IP6K2Q9UHH9 426 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 ANAPC7Q9UJX3 599 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 OR1A2Q9Y585 309 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 ATRXP46100 2492 aa16.39■□□□□ 0.21
COL9A3-208ENST00000469802 ZFC3H1O60293 1989 aaKnown RBP16.38■□□□□ 0.21
COL9A3-208ENST00000469802 SMG1Q96Q15 3661 aaKnown RBP16.38■□□□□ 0.21
COL9A3-208ENST00000469802 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-208ENST00000469802 DXOO77932 396 aaKnown RBP16.38■□□□□ 0.21
COL9A3-208ENST00000469802 RECQL5O94762 991 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-208ENST00000469802 RASGRP1O95267 797 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 PCCBP05166 539 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 ANXA6P08133 673 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 ELFN1P0C7U0 828 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 SERPINB6P35237 376 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 ABCG1P45844 678 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 KIAA1024LP59773 190 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 POLR2LP62875 67 aaKnown RBP16.38■□□□□ 0.21
COL9A3-208ENST00000469802 PERM1Q5SV97 790 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 PLA2G15Q8NCC3 412 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 FGF11Q92914 225 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 NAT6Q93015 286 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 WDR92Q96MX6 357 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 DCBLD2Q96PD2 775 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 NUDCD1Q96RS6 583 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 RCOR3Q9P2K3 495 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-208ENST00000469802 BPTFQ12830 3046 aa16.38■□□□□ 0.21
COL9A3-208ENST00000469802 CPED1A4D0V7 1026 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 IL4RP24394 825 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ITPKBP27987 946 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 HTR1BP28222 390 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 HNRNPH3P31942 346 aaKnown RBP16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ACTN2P35609 894 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 RPIAP49247 311 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ARSEP51690 589 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ZNF235Q14590 738 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ELOCQ15369 112 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ISXQ2M1V0 245 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 RALGPS1Q5JS13 557 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ESRP1Q6NXG1 681 aaKnown RBP16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ALKBH5Q6P6C2 394 aaKnown RBP16.37■□□□□ 0.21
COL9A3-208ENST00000469802 LVRNQ6Q4G3 990 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 HID1Q8IV36 788 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 SDR16C5Q8N3Y7 309 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ATPAF2Q8N5M1 289 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 TPCN2Q8NHX9 752 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 PCDH19Q8TAB3 1148 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 GLMNQ92990 594 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 TSACCQ96A04 125 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-208ENST00000469802 FUBP1Q96AE4 644 aaKnown RBP16.37■□□□□ 0.21
COL9A3-208ENST00000469802 PDXPQ96GD0 296 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 ABCG4Q9H172 646 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 IFNKQ9P0W0 207 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 B4GALT6Q9UBX8 382 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 LUC7L2Q9Y383 392 aaKnown RBP16.37■□□□□ 0.21
COL9A3-208ENST00000469802 DGKBQ9Y6T7 804 aa16.37■□□□□ 0.21
COL9A3-208ENST00000469802 A0A1W2PQ67 120 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 TTC24A2A3L6 582 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-208ENST00000469802 GOLGA6L19H0YKK7 550 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 USP12O75317 370 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 TCEA3O75764 348 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 HOXC4P09017 264 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-208ENST00000469802 ALPIP09923 528 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 TRIM23P36406 574 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 LSSP48449 732 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 PDX1P52945 283 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 CDH6P55285 790 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 SRP54P61011 504 aaKnown RBP16.36■□□□□ 0.21
COL9A3-208ENST00000469802 SOWAHCQ53LP3 525 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-208ENST00000469802 IGF2-ASQ6U949 168 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 ENPP7Q6UWV6 458 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 PELI3Q8N2H9 469 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 ARL10Q8N8L6 244 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 KYQ8NBH2 561 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 ATL2Q8NHH9 583 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 CPLX3Q8WVH0 158 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 HIC2Q96JB3 615 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 COQ10AQ96MF6 247 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 RBM15Q96T37 977 aaKnown RBP eCLIP16.36■□□□□ 0.21
COL9A3-208ENST00000469802 POLR1BQ9H9Y6 1135 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 NOD2Q9HC29 1040 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 FGF22Q9HCT0 170 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 KLQ9UEF7 1012 aa16.36■□□□□ 0.21
COL9A3-208ENST00000469802 A0A1W2PNU3 283 aaPredicted RBP16.35■□□□□ 0.21
COL9A3-208ENST00000469802 TMEM202A6NGA9 273 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms