RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 LYNP07948 512 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 TFEBP19484 476 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 TM4SF4P48230 202 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 ARCN1P48444 511 aaKnown RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 RAB10P61026 200 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 ZNF235Q14590 738 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 TAF12Q16514 161 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 NFE2Q16621 373 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 LSM12Q3MHD2 195 aaKnown RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 CLEC6AQ6EIG7 209 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 LRRC8EQ6NSJ5 796 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 FUT10Q6P4F1 479 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 SNX32Q86XE0 403 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 TXNDC5Q8NBS9 432 aaKnown RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 CAPNS2Q96L46 248 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 NR1H4Q96RI1 486 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 SLX1AQ9BQ83 275 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 ILKAPQ9H0C8 392 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 CDH19Q9H159 772 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 PLK2Q9NYY3 685 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 SRRDQ9UH36 339 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 CIDEBQ9UHD4 219 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 SSX2IPQ9Y2D8 614 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 PCDHGC4Q9Y5F7 938 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 PTGDR2Q9Y5Y4 395 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 THSD7BQ9C0I4 1608 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 ERI2A8K979 691 aaKnown RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 TRAFD1O14545 582 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 MAP3K7O43318 606 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 GRK2P25098 689 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 RGRP47804 291 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 SERPINH1P50454 418 aaKnown RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 DSC1Q08554 894 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 ASPHQ12797 758 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 MAP7Q14244 749 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 KRT72Q14CN4 511 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 CCDC153Q494R4 210 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 SIRPB2Q5JXA9 342 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 RANBP10Q6VN20 620 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 DPF3Q92784 378 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 WBP2Q969T9 261 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 TMA16Q96EY4 203 aaKnown RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 GPR22Q99680 433 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 SARS2Q9NP81 518 aaKnown RBP9.48□□□□□ -0.89
TOP3A-203ENST00000469739 OXSMQ9NWU1 459 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 DOCK6Q96HP0 2047 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 MAGEB16A2A368 324 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 ZNF195O14628 629 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 FGF10O15520 208 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SIX3O95343 332 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 KCNC1P48547 511 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 RENBPP51606 427 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SGSHP51688 502 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SLC34A1Q06495 639 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SLC12A1Q13621 1099 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 PPP1R3AQ16821 1122 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 RABGAP1LQ5R372 815 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 NADSYN1Q6IA69 706 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SDE2Q6IQ49 451 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 CYS1Q717R9 158 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 ZNF184Q99676 751 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 TRPC7Q9HCX4 862 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 MKS1Q9NXB0 559 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 TLR6Q9Y2C9 796 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 PCDHB12Q9Y5F1 795 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SUPT7LO94864 414 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 OAZ2O95190 189 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 MPOP05164 745 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 TYMPP19971 482 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SLC6A4P31645 630 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 CYP2C18P33260 490 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 ARL1P40616 181 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 CDKN1CP49918 316 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 CDKN2DP55273 166 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 MANEALQ5VSG8 457 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 LPCAT4Q643R3 524 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SEL1L3Q68CR1 1132 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 FBXO44Q9H4M3 255 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 TLE6Q9H808 572 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 ENTPD7Q9NQZ7 604 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 MARCH5Q9NX47 278 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 UTP6Q9NYH9 597 aaKnown RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 PRKAG2Q9UGJ0 569 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 ZFP37Q9Y6Q3 630 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 A0A088AWK7 358 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 PEX11BO96011 259 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 ASLP04424 464 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 ATF6P18850 670 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 KLF10Q13118 480 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 CBX3Q13185 183 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 GPNMBQ14956 572 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 MAP3K21Q5TCX8 1036 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 TRIM67Q6ZTA4 783 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 KBTBD2Q8IY47 623 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms