RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TRAF2Q12933 501 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CTBP1Q13363 440 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 RAB30Q15771 203 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CHI3L2Q15782 390 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 FASTKD1Q53R41 847 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 PITRM1Q5JRX3 1037 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 ARMC12Q5T9G4 340 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CGB2Q6NT52 195 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 KLC3Q6P597 504 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 LINGO4Q6UY18 593 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TRPM8Q7Z2W7 1104 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TBC1D1Q86TI0 1168 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CRLF3Q8IUI8 442 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 DENND6AQ8IWF6 608 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 PAF1Q8N7H5 531 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 GPATCH11Q8N954 259 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TTC8Q8TAM2 541 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 PPP4R1Q8TF05 950 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 SMG7Q92540 1137 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 ISG20Q96AZ6 181 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TCEAL4Q96EI5 215 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 DNAJC1Q96KC8 554 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TUBGCP5Q96RT8 1024 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CDCA3Q99618 268 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 BBS2Q9BXC9 721 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CEP44Q9C0F1 390 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 C12orf65Q9H3J6 166 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 ATP13A3Q9H7F0 1226 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 POPDC3Q9HBV1 291 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 SLCO1B3Q9NPD5 702 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 MARK1Q9P0L2 795 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 COPG2Q9UBF2 871 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CHKBQ9Y259 395 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 ACOT9Q9Y305 439 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 FCF1Q9Y324 198 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 MRPS23Q9Y3D9 190 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 HCFC2Q9Y5Z7 792 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 PLXNB3Q9ULL4 1909 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 COL4A3Q01955 1670 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 PLXNA2O75051 1894 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CCDC195A0A1B0GUA6 201 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 TMEM114B3SHH9 223 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 ANKRD66B4E2M5 251 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 NEDD8-MDP1E9PL57 170 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 STX7O15400 261 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CD3EAPO15446 510 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 PAPLNO95428 1278 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CD160O95971 181 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 GOT2P00505 430 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SERPINE1P05121 402 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SLC35E2BP0CK96 405 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 MYL2P10916 166 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 PABPC1P11940 636 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CEBPBP17676 345 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 NFKBIAP25963 317 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SLC26A3P40879 764 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 RAD51Q06609 339 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 BST1Q10588 318 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 STX3Q13277 289 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CAMK1Q14012 370 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 IHHQ14623 411 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 PCLAFQ15004 111 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 DUSP6Q16828 381 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SLC5A9Q2M3M2 681 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 TYSND1Q2T9J0 566 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SPDYAQ5MJ70 313 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 C22orf39Q6P5X5 142 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 GRASPQ7Z6J2 395 aaPredicted RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 PTAR1Q7Z6K3 402 aaPredicted RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SLC41A1Q8IVJ1 513 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 APCDD1Q8J025 514 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 AHI1Q8N157 1196 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CELF5Q8N6W0 485 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 PCDH20Q8N6Y1 951 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 OR2AP1Q8NGE2 309 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 OR4L1Q8NH43 312 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 WFIKKN2Q8TEU8 576 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 PDCD6IPQ8WUM4 868 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 C10orf82Q8WW14 230 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 IRF7Q92985 503 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 BHMTQ93088 406 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 HDAC10Q969S8 669 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 TCF12Q99081 682 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SMG9Q9H0W8 520 aaKnown RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CCDC68Q9H2F9 335 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CAB39LQ9H9S4 337 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 NMRAL1Q9HBL8 299 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 NPHS2Q9NP85 383 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 SPHK2Q9NRA0 654 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 FBXO6Q9NRD1 293 aaPredicted RBP9.37□□□□□ -0.91
SMC1A-205ENST00000469129 THAP1Q9NVV9 213 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 MSRAQ9UJ68 235 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 EMCNQ9ULC0 261 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 CCL26Q9Y258 94 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 HS3ST2Q9Y278 367 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 PKP3Q9Y446 797 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms