RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SZRD1Q7Z422 152 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 DENND6AQ8IWF6 608 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 ARHGAP12Q8IWW6 846 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 RPAP2Q8IXW5 612 aaPredicted RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 TMEM174Q8WUU8 243 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 SNAPC3Q92966 411 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 ZC3HAV1LQ96H79 300 aaKnown RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 ZNF333Q96JL9 665 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 SIN3AQ96ST3 1273 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 WDR77Q9BQA1 342 aaPredicted RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 CDT1Q9H211 546 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 KLHL31Q9H511 634 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 KIF9Q9HAQ2 790 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 NDRG3Q9UGV2 375 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 ZNF580Q9UK33 172 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 ZNF215Q9UL58 517 aaPredicted RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 PCDHA12Q9UN75 941 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 COG5Q9UP83 839 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 LSM4Q9Y4Z0 139 aaKnown RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 A3GALT2U3KPV4 340 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 H3BNX3 289 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 MDM4O15151 490 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 TIMM44O43615 452 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 HNRNPCL1O60812 293 aaKnown RBP5.27□□□□□ -1.57
LSM5-209ENST00000468872 MMP3P08254 477 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 HOXB5P09067 269 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 PCNAP12004 261 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 ENO3P13929 434 aaPredicted RBP5.27□□□□□ -1.57
LSM5-209ENST00000468872 SHMT1P34896 483 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 AVPR1AP37288 418 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 UBA7P41226 1012 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 RAD52P43351 418 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 PPP3CCP48454 512 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 F2RL1P55085 397 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 FAM27E3Q08E93 113 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 NIPAL4Q0D2K0 466 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 LPIN1Q14693 890 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 WTAPQ15007 396 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 ESCO2Q56NI9 601 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 HEPHL1Q6MZM0 1159 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 ENOSF1Q7L5Y1 443 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 RBFAQ8N0V3 343 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 TMEM18Q96B42 140 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 CMTM3Q96MX0 182 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 NPFFR1Q9GZQ6 430 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 KAT14Q9H8E8 782 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 ANKRD10Q9NXR5 420 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 SQORQ9Y6N5 450 aa5.27□□□□□ -1.57
LSM5-209ENST00000468872 FAM90A8PA6NJQ4 464 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 A8MZ25 164 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 MYO1GB0I1T2 1018 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 BTBD18B2RXH4 712 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 OR2C1O95371 312 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 TOMM40O96008 361 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 IFNA2P01563 188 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 HSP90AA1P07900 732 aaKnown RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 FAM90A13PP0C7W8 464 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 FAM90A24PP0C7X0 464 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 CHRNB2P17787 502 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 AGAP20933 346 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 CCKARP32238 428 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 PSMB10P40306 273 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 CDH12P55289 794 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 OLIG2Q13516 323 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 SOWAHAQ2M3V2 549 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 KLHL22Q53GT1 634 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 RILPL1Q5EBL4 403 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 SGO1Q5FBB7 561 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 CXorf66Q5JRM2 361 aaPredicted RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 NUGGCQ68CJ6 796 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 HIST2H2BCQ6DN03 193 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 HIST2H2BDQ6DRA6 164 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 NCAPH2Q6IBW4 605 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 FBXO46Q6PJ61 603 aaPredicted RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 LCTLQ6UWM7 567 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 PIM3Q86V86 326 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 CAMK1DQ8IU85 385 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 ZCCHC9Q8N567 271 aaKnown RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 SRBD1Q8N5C6 995 aaKnown RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 PARP16Q8N5Y8 322 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 ENGASEQ8NFI3 743 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 WASF1Q92558 559 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 C1orf74Q96LT6 269 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 MSTO1Q9BUK6 570 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 MAGEE1Q9HCI5 957 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 DDX4Q9NQI0 724 aaKnown RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 ANKEF1Q9NU02 776 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 DLGAP2Q9P1A6 1054 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 CNOT8Q9UFF9 292 aaKnown RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 PCDHGB4Q9UN71 923 aa5.26□□□□□ -1.57
LSM5-209ENST00000468872 AAR2Q9Y312 384 aaKnown RBP5.26□□□□□ -1.57
LSM5-209ENST00000468872 UTYO14607 1347 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 IGKV2D-30A0A075B6S6 120 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 TMCC2O75069 709 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 IPO7O95373 1038 aaKnown RBP5.25□□□□□ -1.57
LSM5-209ENST00000468872 CRYABP02511 175 aaKnown RBP5.25□□□□□ -1.57
LSM5-209ENST00000468872 CSH1P0DML2 217 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 CSH2P0DML3 217 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 TFPIP10646 304 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms