RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 LRRN4CLQ8ND94 238 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 OR52K2Q8NGK3 314 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 PLEKHO2Q8TD55 490 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 IRGQQ8WZA9 623 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 SMAD5Q99717 465 aaKnown RBP11.73□□□□□ -0.53
VPS26A-204ENST00000467852 ACTL8Q9H568 366 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 SPATS2LQ9NUQ6 558 aaKnown RBP11.73□□□□□ -0.53
VPS26A-204ENST00000467852 GPR83Q9NYM4 423 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 C5AR2Q9P296 337 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 SUCOQ9UBS9 1254 aaKnown RBP11.73□□□□□ -0.53
VPS26A-204ENST00000467852 OR1A2Q9Y585 309 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 PCDHGB6Q9Y5F9 930 aa11.73□□□□□ -0.53
VPS26A-204ENST00000467852 SSU72P8A0A1W2PR75 194 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 A6NL46 340 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 F5H423 210 aaPredicted RBP11.72□□□□□ -0.53
VPS26A-204ENST00000467852 ZNF185O15231 689 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 SNAP91O60641 907 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 HLA-DRAP01903 254 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 MT-ND3P03897 115 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 FGF1P05230 155 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 EDN3P14138 238 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 FOSL1P15407 271 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 GJB2P29033 226 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 HMGN5P82970 282 aaKnown RBP11.72□□□□□ -0.53
VPS26A-204ENST00000467852 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 ZNF235Q14590 738 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 INPP5AQ14642 412 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 GOLGA7BQ2TAP0 167 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 CRB2Q5IJ48 1285 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 LYPLAL1Q5VWZ2 237 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 MRGPRGQ86SM5 289 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 KCNMB4Q86W47 210 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 FAM186BQ8IYM0 893 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 ZNF808Q8N4W9 903 aaPredicted RBP11.72□□□□□ -0.53
VPS26A-204ENST00000467852 ATP6V0D2Q8N8Y2 350 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 OR56A4Q8NGH8 313 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 OR10G6Q8NH81 332 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 CCL4L1Q8NHW4 92 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 DQX1Q8TE96 717 aaKnown RBP11.72□□□□□ -0.53
VPS26A-204ENST00000467852 OR1E3Q8WZA6 343 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 RNF31Q96EP0 1072 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 RPRD1AQ96P16 312 aaPredicted RBP11.72□□□□□ -0.53
VPS26A-204ENST00000467852 LLPHQ9BRT6 129 aaKnown RBP11.72□□□□□ -0.53
VPS26A-204ENST00000467852 ZDHHC6Q9H6R6 413 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 CBX8Q9HC52 389 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 VPS51Q9UID3 782 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 ANKRD36A6QL64 1941 aa11.72□□□□□ -0.53
VPS26A-204ENST00000467852 PPM1DO15297 605 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 KIAA0754O94854 1291 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 KELP23276 732 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 ZNF805Q5CZA5 627 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 ZC3H12AQ5D1E8 599 aaKnown RBP11.71□□□□□ -0.53
VPS26A-204ENST00000467852 CARD16Q5EG05 197 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 RRAGBQ5VZM2 374 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 ANKRD40Q6AI12 368 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 MCTP1Q6DN14 999 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 SYVN1Q86TM6 617 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 TTC7BQ86TV6 843 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 PRIMA1Q86XR5 153 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 RASGRP3Q8IV61 690 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 TTC39CQ8N584 583 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 SLC4A11Q8NBS3 891 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 CCDC150Q8NCX0 1101 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 ZNF507Q8TCN5 953 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 CT55Q8WUE5 264 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 RELTQ969Z4 430 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 GPR87Q9BY21 358 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 ZSCAN16Q9H4T2 348 aaPredicted RBP11.71□□□□□ -0.53
VPS26A-204ENST00000467852 FAM13BQ9NYF5 915 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 PLA2G2EQ9NZK7 142 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 MOSPD1Q9UJG1 213 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 TSPAN16Q9UKR8 245 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 NTNG1Q9Y2I2 539 aa11.71□□□□□ -0.53
VPS26A-204ENST00000467852 NSD1Q96L73 2696 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 KCNU1A8MYU2 1149 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 CACNB4O00305 520 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 TNFRSF10CO14798 259 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 AREL1O15033 823 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 CLDN11O75508 207 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 NDUFA10O95299 355 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 CCNB1P14635 433 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 PTGIRP43119 386 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 CCNHP51946 323 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 NDST2P52849 883 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 RPS15P62841 145 aaKnown RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 PEX6Q13608 980 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 WSCD2Q2TBF2 565 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 KCTD16Q68DU8 428 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 CEP97Q8IW35 865 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 PCDH20Q8N6Y1 951 aaKnown RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 PSMB7Q99436 277 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 PRMT1Q99873 361 aaKnown RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 WRAP53Q9BUR4 548 aaKnown RBP11.7□□□□□ -0.54
VPS26A-204ENST00000467852 GSDMCQ9BYG8 508 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 LHX9Q9NQ69 397 aa11.7□□□□□ -0.54
VPS26A-204ENST00000467852 CGNQ9P2M7 1197 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms