RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 PIM3Q86V86 326 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 FEM1CQ96JP0 617 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 MAGEH1Q9H213 219 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 TBX10O75333 385 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 STC2O76061 302 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 GOT2P00505 430 aaKnown RBP11.48□□□□□ -0.57
HPS1-208ENST00000467246 SERPINF2P08697 491 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 LINGO3P0C6S8 592 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 HNRNPLP14866 589 aaKnown RBP eCLIP11.48□□□□□ -0.576e-14■■□□□ 12.1
HPS1-208ENST00000467246 HLA-DPA1P20036 260 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 CORO1AP31146 461 aaKnown RBP11.48□□□□□ -0.57
HPS1-208ENST00000467246 PLK1P53350 603 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 HTRA3P83110 453 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 KLF10Q13118 480 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 TECRLQ5HYJ1 363 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 RIPOR1Q6ZS17 1223 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 TRIM67Q6ZTA4 783 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 UBXN10Q96LJ8 280 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 SMIM14Q96QK8 99 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 CDK5RAP1Q96SZ6 601 aaKnown RBP11.48□□□□□ -0.57
HPS1-208ENST00000467246 CYP4F11Q9HBI6 524 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 BACE2Q9Y5Z0 518 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 CCDC162PA2VCL2 907 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 EPOP01588 193 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 FGF1P05230 155 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 LTA4HP09960 611 aaKnown RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 PRSS56P0CW18 603 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 ATP5F1P24539 256 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 SERPINB5P36952 375 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 SCNN1BP51168 640 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 CDH4P55283 916 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 SEMA3AQ14563 771 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 PDCD2Q16342 344 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 FSCBQ5H9T9 825 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 METTL21CQ5VZV1 264 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 TMEM198Q66K66 360 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 C16orf59Q7L2K0 433 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 RNF168Q8IYW5 571 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 KDM1BQ8NB78 822 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 BRSK1Q8TDC3 778 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 STMN2Q93045 179 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 CMTM5Q96DZ9 223 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 ZNF599Q96NL3 588 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 LENG8Q96PV6 779 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 TRIB3Q96RU7 358 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 SEZ6LQ9BYH1 1024 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 SPATS2LQ9NUQ6 558 aaKnown RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 AFF4Q9UHB7 1163 aaKnown RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 SMNDC1O75940 238 aaKnown RBP eCLIP11.47□□□□□ -0.577e-6■■■■□ 20.7
HPS1-208ENST00000467246 SORBS2O94875 1100 aaKnown RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 SLC4A1P02730 911 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 COX4I1P13073 169 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 KCNC1P48547 511 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 OXCT1P55809 520 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 ACVR1Q04771 509 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 MTA1Q13330 715 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 PLD1Q13393 1074 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 SLC14A2Q15849 920 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 CCDC6Q16204 474 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 AGAP9Q5VTM2 703 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 ALG1LQ6GMV1 187 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 ZNF549Q6P9A3 640 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 NET1Q7Z628 596 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.47□□□□□ -0.57
HPS1-208ENST00000467246 MAB21L3Q8N8X9 362 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 PDZD8Q8NEN9 1154 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 GABPB2Q8TAK5 448 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 FAM136AQ96C01 138 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 MGME1Q9BQP7 344 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 CINPQ9BW66 212 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 PAK6Q9NQU5 681 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 NCKIPSDQ9NZQ3 722 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 UBA2Q9UBT2 640 aaPredicted RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 SEPT3Q9UH03 358 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 AGO1Q9UL18 857 aaKnown RBP11.47□□□□□ -0.57
HPS1-208ENST00000467246 SSX2IPQ9Y2D8 614 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 SPO11Q9Y5K1 396 aa11.47□□□□□ -0.57
HPS1-208ENST00000467246 DPPA5A6NC42 116 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 A8MT66 165 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 CBX4O00257 560 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 CD3EAPO15446 510 aaKnown RBP11.46□□□□□ -0.57
HPS1-208ENST00000467246 KDELR3O43731 214 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 ABLIM3O94929 683 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 GLP2RO95838 553 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 PFKPQ01813 784 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 C1orf146Q5VVC0 180 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 FAM219BQ5XKK7 198 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 FAM117BQ6P1L5 589 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 GALNT7Q86SF2 657 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 PDCD6IPQ8WUM4 868 aaKnown RBP11.46□□□□□ -0.57
HPS1-208ENST00000467246 NRG4Q8WWG1 115 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 PHF21BQ96EK2 531 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 TSPAN17Q96FV3 270 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 SMPD4Q9NXE4 827 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms