RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 BUB1BO60566 1050 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-206ENST00000466591 PCK1P35558 622 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 HSPA9P38646 679 aaKnown RBP17.62■□□□□ 0.41
COL7A1-206ENST00000466591 LSSP48449 732 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 HCAR3P49019 387 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 UBASH3AP57075 661 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 CXADRP78310 365 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 ITKQ08881 620 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 MTM1Q13496 603 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 PIGHQ14442 188 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-206ENST00000466591 ALG11Q2TAA5 492 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 ZFYVE27Q5T4F4 411 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 ARHGAP36Q6ZRI8 547 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 SLC35F3Q8IY50 421 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 NPWQ8N729 165 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 KCNE4Q8WWG9 221 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 GRAMD1AQ96CP6 724 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 ZNF599Q96NL3 588 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 UBL7Q96S82 380 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-206ENST00000466591 BOCQ9BWV1 1114 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 HAUS2Q9NVX0 235 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 IP6K2Q9UHH9 426 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 ANAPC7Q9UJX3 599 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 SATB2Q9UPW6 733 aa17.62■□□□□ 0.41
COL7A1-206ENST00000466591 LY6G6EA0A0G2JKS1 128 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 A0A1W2PQ67 120 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 SYCE3A1L190 88 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 PDE2AO00408 941 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-206ENST00000466591 TCEA3O75764 348 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 RECQL5O94762 991 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-206ENST00000466591 CPP00450 1065 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 TPM3P06753 285 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 KRT10P13645 584 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 GJC1P36383 396 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 RGRP47804 291 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 NSUN2Q08J23 767 aaKnown RBP eCLIP17.61■□□□□ 0.41
COL7A1-206ENST00000466591 HADHQ16836 314 aaKnown RBP17.61■□□□□ 0.41
COL7A1-206ENST00000466591 SOWAHCQ53LP3 525 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-206ENST00000466591 TAF8Q7Z7C8 310 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 SDR16C5Q8N3Y7 309 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 ARL14Q8N4G2 192 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 ARFGAP1Q8N6T3 406 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 ATXN7L3BQ96GX2 97 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 WDR26Q9H7D7 661 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 SUDS3Q9H7L9 328 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-206ENST00000466591 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.61■□□□□ 0.41
COL7A1-206ENST00000466591 U3KQA8 63 aa17.61■□□□□ 0.41
COL7A1-206ENST00000466591 CFAP69A5D8W1 941 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 SERPING1P05155 500 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 CYP2A6P11509 494 aaPredicted RBP17.6■□□□□ 0.41
COL7A1-206ENST00000466591 AMPD1P23109 780 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 ERVPABLB-1P60509 514 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 FANCCQ00597 558 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 ARHGEF7Q14155 803 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 NR1I3Q14994 352 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 PERM1Q5SV97 790 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 E4F1Q66K89 784 aaPredicted RBP17.6■□□□□ 0.41
COL7A1-206ENST00000466591 LVRNQ6Q4G3 990 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 GPR155Q7Z3F1 870 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 ARHGAP12Q8IWW6 846 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 SPACA3Q8IXA5 215 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 NDUFAF2Q8N183 169 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 KYQ8NBH2 561 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 OR6C4Q8NGE1 309 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 OR56A4Q8NGH8 313 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 IQCDQ96DY2 449 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 PSKH2Q96QS6 385 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 GFM1Q96RP9 751 aaKnown RBP17.6■□□□□ 0.41
COL7A1-206ENST00000466591 NUP85Q9BW27 656 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 CLPBQ9H078 707 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 TTLL3Q9Y4R7 772 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 KNTC1P50748 2209 aa17.6■□□□□ 0.41
COL7A1-206ENST00000466591 ARID1BQ8NFD5 2236 aaPredicted RBP17.6■□□□□ 0.41
COL7A1-206ENST00000466591 MYO1FO00160 1098 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 KLK10O43240 276 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 CELA2BP08218 269 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-206ENST00000466591 UCNP55089 124 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 TMPRSS3P57727 454 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 SLC10A7Q0GE19 358 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 DPYSQ14117 519 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 DPYSL2Q16555 572 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 TSR1Q2NL82 804 aaKnown RBP17.59■□□□□ 0.41
COL7A1-206ENST00000466591 FIGNQ5HY92 759 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 CCDC122Q5T0U0 273 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 MARC1Q5VT66 337 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 AFMIDQ63HM1 303 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 DPPA4Q7L190 304 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 LUZP1Q86V48 1076 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 ZSWIM9Q86XI8 627 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 FAM46DQ8NEK8 389 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 CCDC74AQ96AQ1 378 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 VOPP1Q96AW1 172 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 NUS1Q96E22 293 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 CCDC97Q96F63 343 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-206ENST00000466591 PDXPQ96GD0 296 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 ISCUQ9H1K1 167 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 DPEP2Q9H4A9 486 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 CBX8Q9HC52 389 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 EPB41L5Q9HCM4 733 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms