RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 FOXO1Q12778 655 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 BYSLQ13895 437 aaKnown RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ADCK5Q3MIX3 580 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 AMZ1Q400G9 498 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 GALNTL6Q49A17 601 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 TTC22Q5TAA0 569 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 CCNI2Q6ZMN8 369 aaPredicted RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SYNE3Q6ZMZ3 975 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 KRBA2Q6ZNG9 492 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SYT13Q7L8C5 426 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SH2D6Q7Z4S9 175 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SLC9B2Q86UD5 537 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 NFE4Q86UQ8 179 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 MON1AQ86VX9 555 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 C2CD5Q86YS7 1000 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ANKRD18AQ8IVF6 992 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 GHDCQ8N2G8 530 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 CADM4Q8NFZ8 388 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 FAM76AQ8TAV0 307 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 GCC1Q96CN9 775 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ZNF501Q96CX3 271 aaPredicted RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 UBXN10Q96LJ8 280 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 TTC14Q96N46 770 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 F2RL3Q96RI0 385 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 CSF3RQ99062 836 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 NAP1L4Q99733 375 aaKnown RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 PABPC3Q9H361 631 aaKnown RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 CHODLQ9H9P2 273 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SAYSD1Q9NPB0 183 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ENTPD7Q9NQZ7 604 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ATP8A2Q9NTI2 1148 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SPATS2LQ9NUQ6 558 aaKnown RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 FAM118AQ9NWS6 357 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SAGE1Q9NXZ1 904 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 IFT80Q9P2H3 777 aaPredicted RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SLC9A2Q9UBY0 812 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 DAPP1Q9UN19 280 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 RCE1Q9Y256 329 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ZNF711Q9Y462 761 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 GREB1LQ9C091 1923 aaPredicted RBP2.23□□□□□ -2.05
CCDC93-205ENST00000466171 TYW5A2RUC4 315 aaKnown RBP2.23□□□□□ -2.05
CCDC93-205ENST00000466171 ASPDHA6ND91 283 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 RRN3P2A6NIE6 340 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 E7EVH7 732 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 SLC25A17O43808 307 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 SERPINC1P01008 464 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 POLBP06746 335 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 FGF5P12034 268 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 TNNT1P13805 278 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 ARSAP15289 507 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 ZNF10P21506 573 aaPredicted RBP2.23□□□□□ -2.05
CCDC93-205ENST00000466171 HOXC13P31276 330 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 STX2P32856 288 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 KRT2P35908 639 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 CENPAP49450 140 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 RBM5P52756 815 aaKnown RBP eCLIP2.23□□□□□ -2.05
CCDC93-205ENST00000466171 DRG2P55039 364 aaKnown RBP2.23□□□□□ -2.05
CCDC93-205ENST00000466171 PDCLQ13371 301 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 PPIGQ13427 754 aaKnown RBP eCLIP2.23□□□□□ -2.053e-7■■□□□ 14.3
CCDC93-205ENST00000466171 IL13RA2Q14627 380 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 AP5B1Q2VPB7 878 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 LRRC24Q50LG9 513 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 ALFQ53S48 1182 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 TANGO2Q6ICL3 276 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 CYP26C1Q6V0L0 522 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 MMS22LQ6ZRQ5 1243 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 STXBP4Q6ZWJ1 553 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 OR6Y1Q8NGX8 325 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 ARRDC2Q8TBH0 407 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 COG8Q96MW5 612 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 YME1L1Q96TA2 773 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 LRRC4Q9HBW1 653 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 RIC8AQ9NPQ8 531 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 PRDM8Q9NQV8 689 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 OGFRQ9NZT2 677 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 KCND3Q9UK17 655 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 FEM1BQ9UK73 627 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 CNPY2Q9Y2B0 182 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 CLDN16Q9Y5I7 305 aa2.23□□□□□ -2.05
CCDC93-205ENST00000466171 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.22□□□□□ -2.05
CCDC93-205ENST00000466171 PMS2P5A8MQ11 134 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 DVL1O14640 695 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 MID1O15344 667 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 ZIC3O60481 467 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 RFPL2O75678 378 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 NDUFB4O95168 129 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 BAG4O95429 457 aaKnown RBP2.22□□□□□ -2.05
CCDC93-205ENST00000466171 CDH1P12830 882 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 ACP5P13686 325 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 CST5P28325 142 aaPredicted RBP2.22□□□□□ -2.05
CCDC93-205ENST00000466171 ADD2P35612 726 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 PNPLA4P41247 253 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 MTNR1AP48039 350 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 PAPOLAP51003 745 aaKnown RBP2.22□□□□□ -2.05
CCDC93-205ENST00000466171 TERF1P54274 439 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 DVL1P1P54792 670 aaPredicted RBP2.22□□□□□ -2.05
CCDC93-205ENST00000466171 ARSFP54793 590 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 SLC18A2Q05940 514 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 GRIK2Q13002 908 aa2.22□□□□□ -2.05
CCDC93-205ENST00000466171 SLC12A1Q13621 1099 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms