RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 OR6C75A6NL08 312 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 NPIPB11E5RHQ5 1161 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 ASAP2O43150 1006 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 RGS14O43566 566 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 KLK8O60259 260 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 NDUFB4O95168 129 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 SCGB1D1O95968 90 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 FGF3P11487 239 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-211ENST00000466054 NAGAP17050 411 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 CD58P19256 250 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 TNFRSF8P28908 595 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 HOXD3P31249 432 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-211ENST00000466054 CDAP32320 146 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 THPOP40225 353 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 GNAQP50148 359 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 RARSP54136 660 aaKnown RBP4.42□□□□□ -1.7
LRCH3-211ENST00000466054 TRAF1Q13077 416 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 ARHGEF6Q15052 776 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 TBCEQ15813 527 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-211ENST00000466054 SOWAHAQ2M3V2 549 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 ESCO2Q56NI9 601 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 FNBP1LQ5T0N5 605 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 CPLX4Q7Z7G2 160 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 ZNF329Q86UD4 541 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 MB21D2Q8IYB1 491 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-211ENST00000466054 CCDC105Q8IYK2 499 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 ASB5Q8WWX0 329 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 FAM149B1Q96BN6 582 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 MAP7D2Q96T17 732 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 STRA6Q9BX79 667 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 NUF2Q9BZD4 464 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 GLIS2Q9BZE0 524 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-211ENST00000466054 DCLK3Q9C098 648 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 ASAH2Q9NR71 780 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 CTNNAL1Q9UBT7 734 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 FZD10Q9ULW2 581 aa4.42□□□□□ -1.7
LRCH3-211ENST00000466054 BECN2A8MW95 431 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 KDM4EB2RXH2 506 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-211ENST00000466054 LIASO43766 372 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 MMP2P08253 660 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 SPARCP09486 303 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 ETFAP13804 333 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 PLA2G2AP14555 144 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 EDN2P20800 178 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 CAPN3P20807 821 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 AGAP20933 346 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 GPS2Q13227 327 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 ITGADQ13349 1161 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 SIM2Q14190 667 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-211ENST00000466054 RALBP1Q15311 655 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 SHBQ15464 509 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 GSTA5Q7RTV2 222 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-211ENST00000466054 TBC1D1Q86TI0 1168 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-211ENST00000466054 ADSSL1Q8N142 457 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 ZCCHC9Q8N567 271 aaKnown RBP4.41□□□□□ -1.7
LRCH3-211ENST00000466054 PARP16Q8N5Y8 322 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 GPT2Q8TD30 523 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 SMARCE1Q969G3 411 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 MED30Q96HR3 178 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 SLITRK1Q96PX8 696 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 PIP5K1AQ99755 562 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 NTPCRQ9BSD7 190 aaKnown RBP4.41□□□□□ -1.7
LRCH3-211ENST00000466054 CLK4Q9HAZ1 481 aaKnown RBP4.41□□□□□ -1.7
LRCH3-211ENST00000466054 PCDHB16Q9NRJ7 776 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 CYSLTR2Q9NS75 346 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 TMEM51Q9NW97 253 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 HAO1Q9UJM8 370 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 SLC45A1Q9Y2W3 748 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 NFE2L3Q9Y4A8 694 aa4.41□□□□□ -1.7
LRCH3-211ENST00000466054 IGHV4-28A0A0C4DH34 117 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 A0A1W2PRG0 241 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 WNT9BO14905 357 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 TGFB1I1O43294 461 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 SEC14L5O43304 696 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 ITM2AO43736 263 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 USO1O60763 962 aaKnown RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 RGS11O94810 467 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 ITGAXP20702 1163 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 GPTP24298 496 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 RGS2P41220 211 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 NUDT6P53370 316 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 RPS3AP61247 264 aaKnown RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 DCAF7P61962 342 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 OLR1P78380 273 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 DSC1Q08554 894 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 GRIK3Q13003 919 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 DCTN2Q13561 401 aaKnown RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 KRT32Q14532 448 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 DPCR1Q3MIW9 517 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 HYIQ5T013 277 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 KLHL24Q6TFL4 600 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 C4orf50Q6ZRC1 276 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 NEK10Q6ZWH5 1172 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 LINGO2Q7L985 606 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 DHX40Q8IX18 779 aaKnown RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 CNTROBQ8N137 903 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms