RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 PLEKP08567 350 aaPredicted RBP11.85□□□□□ -0.51
CNOT4-208ENST00000465721 LIG3P49916 1009 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 HDAC4P56524 1084 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 RAD51Q06609 339 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 CCDC14Q49A88 953 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 MAP9Q49MG5 647 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 INO80DQ53TQ3 878 aaPredicted RBP11.85□□□□□ -0.51
CNOT4-208ENST00000465721 PHF19Q5T6S3 580 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 NAA35Q5VZE5 725 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 PLA2G15Q8NCC3 412 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 MSANTD4Q8NCY6 345 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 EPS8L1Q8TE68 723 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 CPA5Q8WXQ8 436 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 PMEPA1Q969W9 287 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 FUBP1Q96AE4 644 aaKnown RBP11.85□□□□□ -0.51
CNOT4-208ENST00000465721 HMCESQ96FZ2 354 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 NAA15Q9BXJ9 866 aaKnown RBP11.85□□□□□ -0.51
CNOT4-208ENST00000465721 SLC12A9Q9BXP2 914 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 ADNPQ9H2P0 1102 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 MRPL40Q9NQ50 206 aaKnown RBP11.85□□□□□ -0.51
CNOT4-208ENST00000465721 PCDHB11Q9Y5F2 797 aa11.85□□□□□ -0.51
CNOT4-208ENST00000465721 C2CD4BA6NLJ0 364 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 STMND1H3BQB6 276 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 NUDT21O43809 227 aaKnown RBP11.84□□□□□ -0.51
CNOT4-208ENST00000465721 TNFP01375 233 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 PRKCGP05129 697 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 MMEP08473 750 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 CCL4P13236 92 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 XPAP23025 273 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-208ENST00000465721 SDC4P31431 198 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 PTPN9P43378 593 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 MTIF2P46199 727 aaKnown RBP11.84□□□□□ -0.51
CNOT4-208ENST00000465721 B4GALNT1Q00973 533 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 RALGDSQ12967 914 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 RAPGEF1Q13905 1077 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 MAN2A1Q16706 1144 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 UGP2Q16851 508 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 EFHC2Q5JST6 749 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 MIIPQ5JXC2 388 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 SPECC1LQ69YQ0 1117 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 STRADAQ7RTN6 431 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 TAF8Q7Z7C8 310 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 CREBRFQ8IUR6 639 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 RTL3Q8N8U3 475 aaKnown RBP11.84□□□□□ -0.51
CNOT4-208ENST00000465721 FAM46DQ8NEK8 389 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 OR56A4Q8NGH8 313 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 CCL4L1Q8NHW4 92 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 JOSD2Q8TAC2 188 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 ZNF564Q8TBZ8 553 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-208ENST00000465721 GPT2Q8TD30 523 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 HCAR2Q8TDS4 363 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 RXFP2Q8WXD0 754 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 CENPIQ92674 756 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-208ENST00000465721 NTAN1Q96AB6 310 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 NCAPGQ9BPX3 1015 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 NUDT22Q9BRQ3 303 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 TMEM168Q9H0V1 697 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 EPN3Q9H201 632 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 PDFQ9HBH1 243 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 RDH14Q9HBH5 336 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 LRIT1Q9P2V4 623 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 DAAM1Q9Y4D1 1078 aa11.84□□□□□ -0.51
CNOT4-208ENST00000465721 CLEC18AA5D8T8 446 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 CPNE6O95741 557 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 GM2AP17900 193 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 MMP8P22894 467 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 MAZP56270 477 aaKnown RBP11.83□□□□□ -0.52
CNOT4-208ENST00000465721 POLE2P56282 527 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 SERINC3Q13530 473 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 NR1D2Q14995 579 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 CYTH1Q15438 398 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 ERAP2Q6P179 960 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 BRAT1Q6PJG6 821 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 CLEC18BQ6UXF7 455 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 C17orf82Q86X59 251 aaPredicted RBP11.83□□□□□ -0.52
CNOT4-208ENST00000465721 ZNF354CQ86Y25 554 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 DNAAF5Q86Y56 855 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 PYROXD2Q8N2H3 581 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 PELI3Q8N2H9 469 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 CLEC18CQ8NCF0 446 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 RCBTB1Q8NDN9 531 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 JPH3Q8WXH2 748 aaPredicted RBP11.83□□□□□ -0.52
CNOT4-208ENST00000465721 NKD1Q969G9 470 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 SUV39H2Q9H5I1 410 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 NOCTQ9UK39 431 aaKnown RBP11.83□□□□□ -0.52
CNOT4-208ENST00000465721 HIVEP3Q5T1R4 2406 aa11.83□□□□□ -0.52
CNOT4-208ENST00000465721 RASA4BC9J798 803 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 F8VZ95 297 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 CACNB4O00305 520 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 TNFRSF10CO14798 259 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 HGSO14964 777 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 RASA4O43374 803 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 B4GAT1O43505 415 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 BUB1BO60566 1050 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 GADD45BO75293 160 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 RECQL5O94762 991 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms