RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	SLC45A1	Q9Y2W3	748 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PCNX1	Q96RV3	2341 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CACNA1F	O60840	1977 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SLC22A23	A1A5C7	686 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	WIPF3	A6NGB9	483 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	INPPL1	O15357	1258 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	RBMXL2	O75526	392 aa	Known RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PLAU	P00749	431 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	FGB	P02675	491 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	AKR1A1	P14550	325 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PRPH2	P23942	346 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	HOXA7	P31268	230 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PEX19	P40855	299 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PIP4K2A	P48426	406 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SOX2	P48431	317 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CLCN5	P51795	746 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ALKBH1	Q13686	389 aa	Known RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CCDC6	Q16204	474 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SMN1	Q16637	294 aa	Known RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	COL28A1	Q2UY09	1125 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ARL13A	Q5H913	290 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	EARS2	Q5JPH6	523 aa	Known RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SUSD4	Q5VX71	490 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CTR9	Q6PD62	1173 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	RBM44	Q6ZP01	1051 aa	Known RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CNGA4	Q8IV77	575 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SLC2A12	Q8TD20	617 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SCNM1	Q9BWG6	230 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TRIM31	Q9BZY9	425 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ACAD9	Q9H845	621 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	VEZT	Q9HBM0	779 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	IFT80	Q9P2H3	777 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	KL	Q9UEF7	1012 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	GTF2A1L	Q9UNN4	478 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	UTY	O14607	1347 aa		5.37	□□□□□ -1.55
CACNA1C-223	ENST00000465278	GREB1	Q4ZG55	1949 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NPIPB13	A6NJU9	1138 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NPIPB5	A8MRT5	1133 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NPIPB4	C9JG80	1138 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PPP6C	O00743	305 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TP73	O15350	636 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	LATS1	O95835	1130 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	AGR2	O95994	175 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TUBB4A	P04350	444 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TGM2	P21980	687 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PAX3	P23760	479 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ICAM3	P32942	547 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ARHGAP25	P42331	645 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	RIPK4	P57078	832 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NANOS3	P60323	173 aa	Known RBP	5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	B4GALNT1	Q00973	533 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SRSF4	Q08170	494 aa	Known RBP	5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	LMOD3	Q0VAK6	560 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SLC10A2	Q12908	348 aa	Predicted RBP	5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	STIM1	Q13586	685 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	DLGAP5	Q15398	846 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CCL14	Q16627	93 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CTXN3	Q4LDR2	81 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SLC10A5	Q5PT55	438 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CBWD5	Q5RIA9	395 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	LIPM	Q5VYY2	423 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	LVRN	Q6Q4G3	990 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	C19orf48	Q6RUI8	117 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	RNF144B	Q7Z419	303 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TTC5	Q8N0Z6	440 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ANKRD44	Q8N8A2	993 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	EXD3	Q8N9H8	876 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ADPRHL1	Q8NDY3	354 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	FAM110D	Q8TAY7	271 aa	Predicted RBP	5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ATP2A3	Q93084	1043 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	P2RY11	Q96G91	374 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	FAM84B	Q96KN1	310 aa	Predicted RBP	5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NPAS1	Q99742	590 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TMLHE	Q9NVH6	421 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	THAP1	Q9NVV9	213 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	BABAM1	Q9NWV8	329 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PTGFRN	Q9P2B2	879 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SLC25A13	Q9UJS0	675 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ANAPC4	Q9UJX5	808 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	LRRFIP2	Q9Y608	721 aa	Known RBP	5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	EMSY	Q7Z589	1322 aa		5.36	□□□□□ -1.55
CACNA1C-223	ENST00000465278	DOCK2	Q92608	1830 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SYNRG	Q9UMZ2	1314 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	MAPK8IP3	Q9UPT6	1336 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SMIM35	A0A1B0GVV1	85 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TCRBV7S3A2	A0A539	114 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CHL1	O00533	1208 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NCAM2	O15394	837 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	KLK10	O43240	276 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PNPLA4	P41247	253 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ADPRH	P54922	357 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	RRP1	P56182	461 aa	Known RBP	5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ANKRD1	Q15327	319 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	HSP90B2P	Q58FF3	399 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SLC18B1	Q6NT16	456 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ZNF790	Q6PG37	636 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	MDGA2	Q7Z553	956 aa		5.35	□□□□□ -1.55
CACNA1C-223	ENST00000465278	YTHDF3	Q7Z739	585 aa	Known RBP	5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms