RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ERV3-1Q14264 604 aa9.5□□□□□ -0.89
APP-213ENST00000464867 ANKS6Q68DC2 871 aa9.5□□□□□ -0.89
APP-213ENST00000464867 OGFOD3Q6PK18 319 aa9.5□□□□□ -0.89
APP-213ENST00000464867 ENPP7Q6UWV6 458 aa9.5□□□□□ -0.89
APP-213ENST00000464867 CEACAM20Q6UY09 585 aa9.5□□□□□ -0.89
APP-213ENST00000464867 EPM2AIP1Q7L775 607 aaPredicted RBP9.5□□□□□ -0.89
APP-213ENST00000464867 GDF7Q7Z4P5 450 aa9.5□□□□□ -0.89
APP-213ENST00000464867 ATP6V0D2Q8N8Y2 350 aa9.5□□□□□ -0.89
APP-213ENST00000464867 CHST14Q8NCH0 376 aa9.5□□□□□ -0.89
APP-213ENST00000464867 CENPTQ96BT3 561 aa9.5□□□□□ -0.89
APP-213ENST00000464867 BTN2A3PQ96KV6 586 aa9.5□□□□□ -0.89
APP-213ENST00000464867 LURAP1Q96LR2 239 aa9.5□□□□□ -0.89
APP-213ENST00000464867 DPYSL5Q9BPU6 564 aa9.5□□□□□ -0.89
APP-213ENST00000464867 MRPL40Q9NQ50 206 aaKnown RBP9.5□□□□□ -0.89
APP-213ENST00000464867 RRN3Q9NYV6 651 aa9.5□□□□□ -0.89
APP-213ENST00000464867 TSPAN16Q9UKR8 245 aa9.5□□□□□ -0.89
APP-213ENST00000464867 B4DGG1 531 aa9.49□□□□□ -0.89
APP-213ENST00000464867 PDGFAP04085 211 aa9.49□□□□□ -0.89
APP-213ENST00000464867 SETSIPP0DME0 302 aa9.49□□□□□ -0.89
APP-213ENST00000464867 NFKB1P19838 968 aa9.49□□□□□ -0.89
APP-213ENST00000464867 IGFALSP35858 605 aa9.49□□□□□ -0.89
APP-213ENST00000464867 GATA4P43694 442 aa9.49□□□□□ -0.89
APP-213ENST00000464867 PPM1FP49593 454 aaPredicted RBP9.49□□□□□ -0.89
APP-213ENST00000464867 LIMK2P53671 638 aa9.49□□□□□ -0.89
APP-213ENST00000464867 RAD23BP54727 409 aa9.49□□□□□ -0.89
APP-213ENST00000464867 RNASE9P60153 205 aaKnown RBP9.49□□□□□ -0.89
APP-213ENST00000464867 SRP54P61011 504 aaKnown RBP9.49□□□□□ -0.89
APP-213ENST00000464867 DLG4P78352 724 aa9.49□□□□□ -0.89
APP-213ENST00000464867 AMPD3Q01432 767 aa9.49□□□□□ -0.89
APP-213ENST00000464867 HLTFQ14527 1009 aaKnown RBP eCLIP9.49□□□□□ -0.89
APP-213ENST00000464867 ALG11Q2TAA5 492 aa9.49□□□□□ -0.89
APP-213ENST00000464867 FAM26FQ5R3K3 315 aa9.49□□□□□ -0.89
APP-213ENST00000464867 CXorf57Q6NSI4 855 aaKnown RBP9.49□□□□□ -0.89
APP-213ENST00000464867 CIR1Q86X95 450 aaPredicted RBP9.49□□□□□ -0.89
APP-213ENST00000464867 ESX1Q8N693 406 aa9.49□□□□□ -0.89
APP-213ENST00000464867 SLC4A11Q8NBS3 891 aa9.49□□□□□ -0.89
APP-213ENST00000464867 OR4D9Q8NGE8 314 aa9.49□□□□□ -0.89
APP-213ENST00000464867 KIAA1524Q8TCG1 905 aa9.49□□□□□ -0.89
APP-213ENST00000464867 RTP4Q96DX8 246 aa9.49□□□□□ -0.89
APP-213ENST00000464867 NUDT22Q9BRQ3 303 aa9.49□□□□□ -0.89
APP-213ENST00000464867 SLC25A23Q9BV35 468 aa9.49□□□□□ -0.89
APP-213ENST00000464867 PANK2Q9BZ23 570 aa9.49□□□□□ -0.89
APP-213ENST00000464867 OCIAD1Q9NX40 245 aa9.49□□□□□ -0.89
APP-213ENST00000464867 DNAJB12Q9NXW2 375 aaKnown RBP9.49□□□□□ -0.89
APP-213ENST00000464867 KLQ9UEF7 1012 aa9.49□□□□□ -0.89
APP-213ENST00000464867 ARHGEF17Q96PE2 2063 aaPredicted RBP9.49□□□□□ -0.89
APP-213ENST00000464867 A6NCN8 305 aa9.48□□□□□ -0.89
APP-213ENST00000464867 ANKUB1A6NFN9 424 aa9.48□□□□□ -0.89
APP-213ENST00000464867 PRSS44E7EML9 344 aa9.48□□□□□ -0.89
APP-213ENST00000464867 B4GAT1O43505 415 aa9.48□□□□□ -0.89
APP-213ENST00000464867 KATNA1O75449 491 aa9.48□□□□□ -0.89
APP-213ENST00000464867 TM7SF2O76062 418 aa9.48□□□□□ -0.89
APP-213ENST00000464867 STK17BO94768 372 aa9.48□□□□□ -0.89
APP-213ENST00000464867 MT-CO1P00395 513 aa9.48□□□□□ -0.89
APP-213ENST00000464867 GJB2P29033 226 aa9.48□□□□□ -0.89
APP-213ENST00000464867 DLSTP36957 453 aa9.48□□□□□ -0.89
APP-213ENST00000464867 STAT5AP42229 794 aa9.48□□□□□ -0.89
APP-213ENST00000464867 IDH3AP50213 366 aa9.48□□□□□ -0.89
APP-213ENST00000464867 DNA2P51530 1060 aa9.48□□□□□ -0.89
APP-213ENST00000464867 KNOP1Q1ED39 458 aaKnown RBP9.48□□□□□ -0.89
APP-213ENST00000464867 PRR30Q53SZ7 412 aaPredicted RBP9.48□□□□□ -0.89
APP-213ENST00000464867 SPNS3Q6ZMD2 512 aa9.48□□□□□ -0.89
APP-213ENST00000464867 DPY19L3Q6ZPD9 716 aa9.48□□□□□ -0.89
APP-213ENST00000464867 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
APP-213ENST00000464867 UBA3Q8TBC4 463 aa9.48□□□□□ -0.89
APP-213ENST00000464867 DQX1Q8TE96 717 aaKnown RBP9.48□□□□□ -0.89
APP-213ENST00000464867 ALG14Q96F25 216 aa9.48□□□□□ -0.89
APP-213ENST00000464867 SLC39A13Q96H72 371 aa9.48□□□□□ -0.89
APP-213ENST00000464867 RPRD1AQ96P16 312 aaPredicted RBP9.48□□□□□ -0.89
APP-213ENST00000464867 RBM15Q96T37 977 aaKnown RBP eCLIP9.48□□□□□ -0.89
APP-213ENST00000464867 HEPHQ9BQS7 1158 aa9.48□□□□□ -0.89
APP-213ENST00000464867 TRIM62Q9BVG3 475 aa9.48□□□□□ -0.89
APP-213ENST00000464867 BACH2Q9BYV9 841 aa9.48□□□□□ -0.89
APP-213ENST00000464867 TWSG1Q9GZX9 223 aa9.48□□□□□ -0.89
APP-213ENST00000464867 TNKS2Q9H2K2 1166 aa9.48□□□□□ -0.89
APP-213ENST00000464867 APOBEC3GQ9HC16 384 aaKnown RBP9.48□□□□□ -0.89
APP-213ENST00000464867 LATS2Q9NRM7 1088 aa9.48□□□□□ -0.89
APP-213ENST00000464867 CISHQ9NSE2 258 aa9.48□□□□□ -0.89
APP-213ENST00000464867 FAM13BQ9NYF5 915 aa9.48□□□□□ -0.89
APP-213ENST00000464867 XPO7Q9UIA9 1087 aaKnown RBP9.48□□□□□ -0.89
APP-213ENST00000464867 KCND3Q9UK17 655 aa9.48□□□□□ -0.89
APP-213ENST00000464867 G3BP2Q9UN86 482 aaKnown RBP9.48□□□□□ -0.89
APP-213ENST00000464867 MRPS18BQ9Y676 258 aaKnown RBP9.48□□□□□ -0.89
APP-213ENST00000464867 RPS6KL1Q9Y6S9 549 aa9.48□□□□□ -0.89
APP-213ENST00000464867 PIPSLA2A3N6 862 aa9.47□□□□□ -0.89
APP-213ENST00000464867 KCNU1A8MYU2 1149 aa9.47□□□□□ -0.89
APP-213ENST00000464867 K7ERQ8 282 aa9.47□□□□□ -0.89
APP-213ENST00000464867 DPM1O60762 260 aa9.47□□□□□ -0.89
APP-213ENST00000464867 ENDOD1O94919 500 aa9.47□□□□□ -0.89
APP-213ENST00000464867 FBXO21O94952 628 aa9.47□□□□□ -0.89
APP-213ENST00000464867 CBX6O95503 412 aa9.47□□□□□ -0.89
APP-213ENST00000464867 SLC2A3P11169 496 aa9.47□□□□□ -0.89
APP-213ENST00000464867 CD19P15391 556 aa9.47□□□□□ -0.89
APP-213ENST00000464867 RRM1P23921 792 aa9.47□□□□□ -0.89
APP-213ENST00000464867 SEMA5AQ13591 1074 aa9.47□□□□□ -0.89
APP-213ENST00000464867 NFATC4Q14934 902 aa9.47□□□□□ -0.89
APP-213ENST00000464867 ZC3H12AQ5D1E8 599 aaKnown RBP9.47□□□□□ -0.89
APP-213ENST00000464867 SPECC1LQ69YQ0 1117 aa9.47□□□□□ -0.89
APP-213ENST00000464867 JMJD6Q6NYC1 403 aaPredicted RBP9.47□□□□□ -0.89
APP-213ENST00000464867 C22orf39Q6P5X5 142 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms