RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 BMXP51813 675 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 NUBP1P53384 320 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 TAS2R39P59534 338 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 TPI1P60174 286 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 PITX1P78337 314 aaPredicted RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 ADARB1P78563 741 aaKnown RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 BNIP3Q12983 259 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 ZNF460Q14592 562 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 NR1D2Q14995 579 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 SNX17Q15036 470 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 ZBTB6Q15916 424 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 PPP1R3AQ16821 1122 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 FAM83EQ2M2I3 478 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 CCDC92Q53HC0 331 aaPredicted RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 DCAF6Q58WW2 860 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 NBPF12Q5TAG4 269 aaPredicted RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 LAYNQ6UX15 382 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 XKR5Q6UX68 686 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 LBX2Q6XYB7 198 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 KIAA0408Q6ZU52 694 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 RETREG3Q86VR2 466 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 FUNDC1Q8IVP5 155 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 CMTR2Q8IYT2 770 aaKnown RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 PAPD5Q8NDF8 572 aaKnown RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 CYGBQ8WWM9 190 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 FAM149B1Q96BN6 582 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 FBXL20Q96IG2 436 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 ELMO2Q96JJ3 720 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 SLX1AQ9BQ83 275 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 APOL2Q9BQE5 337 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 LPIN3Q9BQK8 851 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 GPN2Q9H9Y4 310 aaPredicted RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 CDHR5Q9HBB8 845 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 TNFRSF12AQ9NP84 129 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 RIC8BQ9NVN3 520 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 INTS10Q9NVR2 710 aaKnown RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 GIN1Q9NXP7 522 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 ZNF639Q9UID6 485 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 AURKCQ9UQB9 309 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 MYO18AQ92614 2054 aaKnown RBP7.33□□□□□ -1.24
USP48-206ENST00000464577 WDR90Q96KV7 1748 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 CCDC78A2IDD5 438 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CFAP99D6REC4 459 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 FXYD1O00168 92 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PPEF2O14830 753 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 DYNC1LI2O43237 492 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 SEC14L2O76054 403 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 UMPSP11172 480 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CPB1P15086 417 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 ARNTP27540 789 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 RFC2P35250 354 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 GNL1P36915 607 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 SLC1A2P43004 574 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 RPS9P46781 194 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 PGGT1BP53609 377 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SLC12A2P55011 1212 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 ADIGQ0VDE8 80 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SLC14A2Q15849 920 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CYBRD1Q53TN4 286 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 AGAP9Q5VTM2 703 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 BTBD8Q5XKL5 378 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 KIAA0930Q6ICG6 404 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 OGFOD2Q6N063 350 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PIGZQ86VD9 579 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 DENND6AQ8IWF6 608 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SLC15A3Q8IY34 581 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CPNE9Q8IYJ1 553 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 NPWQ8N729 165 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PPHLN1Q8NEY8 458 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 BEST2Q8NFU1 509 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 FAM110BQ8TC76 370 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SLC2A14Q8TDB8 520 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 RAB2BQ8WUD1 216 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 KCTD13Q8WZ19 329 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 L3HYPDHQ96EM0 354 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 MAGED4Q96JG8 741 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SPATA33Q96N06 139 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PPP1R2P1Q96PQ5 205 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PPP1R10Q96QC0 940 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 TBL1YQ9BQ87 522 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 UNKQ9C0B0 810 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 GSTO2Q9H4Y5 243 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 MAGEE1Q9HCI5 957 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PIGVQ9NUD9 493 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 MAP10Q9P2G4 905 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 SFMBT1Q9UHJ3 866 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 OAZ3Q9UMX2 235 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 AAR2Q9Y312 384 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 TRAF6Q9Y4K3 522 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 BRWD3Q6RI45 1802 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CITO14578 2027 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 A0A0J9YYE9 177 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 TCRBV5S2A0A599 114 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 HTR3EA5X5Y0 456 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 TMEM247A6NEH6 219 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 NEMP2A6NFY4 417 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 FAM72CH0Y354 149 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 KPNA4O00629 521 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 SOCS7O14512 581 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms