RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 IPO13O94829 963 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 SIX3O95343 332 aaPredicted RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 GSNP06396 782 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 ATP5BP06576 529 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 FGFR1P11362 822 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 MLNP12872 115 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CYP4B1P13584 511 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 IDH2P48735 452 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 CLCN5P51795 746 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CDH15P55291 814 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 SQLEQ14534 574 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 AARS2Q5JTZ9 985 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 NCBP2-AS2Q69YL0 99 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 SLC9A4Q6AI14 798 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CAND1Q86VP6 1230 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 DENND1CQ8IV53 801 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 DGCR14Q96DF8 476 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 SIGLEC10Q96LC7 697 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 C6orf62Q9GZU0 229 aaPredicted RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 AGO3Q9H9G7 860 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 SSU72Q9NP77 194 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 CDH9Q9ULB4 789 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 COMMD3-BMI1R4GMX3 469 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 LOC100506127A0A0U1RQW1 187 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 KRT8P05787 483 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 HDCP19113 662 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 GRK4P32298 578 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 GGT5P36269 586 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 STXBP5Q5T5C0 1151 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 HECTD2Q5U5R9 776 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 POTEHQ6S545 545 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CLYBLQ8N0X4 340 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 UBR7Q8N806 425 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 NAT16Q8N8M0 369 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 NIPA2Q8N8Q9 360 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 TNIP2Q8NFZ5 429 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 OR4K2Q8NGD2 314 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 XYLT2Q9H1B5 865 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CAPN10Q9HC96 672 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 ARL15Q9NXU5 204 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 GIMAP2Q9UG22 337 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CIDEBQ9UHD4 219 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 TRPV2Q9Y5S1 764 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 A0A1W2PQH9 124 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 MGAT4DA6NG13 374 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 TBKBP1A7MCY6 615 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 IQCF5A8MTL0 148 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 F8W810 466 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 H3BMM5 538 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 PRKCGP05129 697 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 FCGR1AP12314 374 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 AXLP30530 894 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 PSMD7P51665 324 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 SEMG2Q02383 582 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CDK18Q07002 472 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 RNF180Q86T96 592 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 TMEM86AQ8N2M4 240 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 VPS33AQ96AX1 596 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 ZYG11BQ9C0D3 744 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 ASB8Q9H765 288 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 GPBP1L1Q9HC44 474 aaPredicted RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 GALNT8Q9NY28 637 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 RBPJLQ9UBG7 517 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 PDLIM1O00151 329 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 ATG7O95352 703 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 OCM2P0CE71 109 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 OCMP0CE72 109 aaPredicted RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 EPB42P16452 691 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 ADSLP30566 484 aaPredicted RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 RFX3P48380 749 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 NOVP48745 357 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 PPIL2Q13356 520 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 DPYSL2Q16555 572 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 INSCQ1MX18 579 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 DUSP28Q4G0W2 176 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 CWF19L1Q69YN2 538 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 OLFML1Q6UWY5 402 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 LINGO4Q6UY18 593 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 PPTC7Q8NI37 304 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 LZICQ8WZA0 190 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 MAGED4Q96JG8 741 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 PLEKHG4BQ96PX9 1271 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 PCYT2Q99447 389 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 STN1Q9H668 368 aaKnown RBP9.11□□□□□ -0.95
HPS4-208ENST00000464362 PALMDQ9NP74 551 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 SLC2A6Q9UGQ3 507 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 SEPT3Q9UH03 358 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 LTBP4Q8N2S1 1624 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 UBXN8O00124 270 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 NFKBIEO00221 500 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 CD3EAPO15446 510 aaKnown RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 TBX18O95935 607 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 MMP3P08254 477 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 AKR1A1P14550 325 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 IFNA8P32881 189 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 PRKG2Q13237 762 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 TCEA2Q15560 299 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 MAPKAPK3Q16644 382 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 TRIM74Q86UV6 250 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms