RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 RECQLP46063 649 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 CLN3Q13286 438 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 DPYSQ14117 519 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 NR0B2Q15466 257 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 SMTNL2Q2TAL5 461 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 C6orf132Q5T0Z8 1188 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 ERMARDQ5T6L9 678 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 KIAA1614Q5VZ46 1190 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 RETSATQ6NUM9 610 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 INO80CQ6PI98 192 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 RBM44Q6ZP01 1051 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 NYAP1Q6ZVC0 841 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZSCAN30Q86W11 494 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 CNGA4Q8IV77 575 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 ARHGAP12Q8IWW6 846 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 PHACTR4Q8IZ21 702 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZNF564Q8TBZ8 553 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 LMX1AQ8TE12 382 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 ASB12Q8WXK4 309 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 ISG20Q96AZ6 181 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 CENPTQ96BT3 561 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 MRFAP1L1Q96HT8 127 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 FEM1CQ96JP0 617 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 EPAS1Q99814 870 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 SPON2Q9BUD6 331 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 CLPBQ9H078 707 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 ABCG4Q9H172 646 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 DHX35Q9H5Z1 703 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 LRRC19Q9H756 370 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 NHEJ1Q9H9Q4 299 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 SPTLC3Q9NUV7 552 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 NCKIPSDQ9NZQ3 722 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 HECAQ9UBI9 543 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 APOBEC3BQ9UH17 382 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 SALL4Q9UJQ4 1053 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 MFHAS1Q9Y4C4 1052 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 USP9YO00507 2555 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 CAPN8A6NHC0 703 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 LMO7DNF2Z398 122 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 NTN3O00634 580 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-210ENST00000462553 MUSKO15146 869 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 TSPAN6O43657 245 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 CREB3O43889 395 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 RAMP2O60895 175 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 RNF8O76064 485 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 GSRP00390 522 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 UGT2B4P06133 528 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 TPM1P09493 284 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 TMEM253P0C7T8 217 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 KRT10P13645 584 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 C6P13671 934 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 DNA2P51530 1060 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 ARSEP51690 589 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 TPI1P60174 286 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC20A2Q08357 652 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 C1orf61Q13536 156 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 DPYSL2Q16555 572 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZNF805Q5CZA5 627 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 PRRT3Q5FWE3 981 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 LRRC73Q5JTD7 316 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 ATXN7L2Q5T6C5 722 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-210ENST00000462553 AFMIDQ63HM1 303 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 MACC1Q6ZN28 852 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 B3GNT8Q7Z7M8 397 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 PSTKQ8IV42 348 aaKnown RBP8□□□□□ -1.13
CDC42BPA-210ENST00000462553 TP53INP2Q8IXH6 220 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 UMODL1-AS1Q8N2C9 162 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 NPWQ8N729 165 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 KYQ8NBH2 561 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 TP53I13Q8NBR0 393 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-210ENST00000462553 NETO2Q8NC67 525 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 OR2AP1Q8NGE2 309 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 RAB7BQ96AH8 199 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 GRAMD1AQ96CP6 724 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 HMCESQ96FZ2 354 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 TBATAQ96M53 351 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 IL12RB2Q99665 862 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC3Q9BQI4 270 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 MAGEH1Q9H213 219 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 PDFQ9HBH1 243 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 MBNL1Q9NR56 388 aaKnown RBP8□□□□□ -1.13
CDC42BPA-210ENST00000462553 ETNK2Q9NVF9 386 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 CWC15Q9P013 229 aaKnown RBP8□□□□□ -1.13
CDC42BPA-210ENST00000462553 UVRAGQ9P2Y5 699 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 RABGEF1Q9UJ41 708 aa8□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC187A0A096LP49 1063 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 EIF3CLB5ME19 914 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 B8ZZF3 427 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 RASA4BC9J798 803 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 D6RAR5 112 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 EEF2KO00418 725 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 FGF10O15520 208 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 EFSO43281 561 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 RASA4O43374 803 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 KDELR3O43731 214 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 PRPSAP2O60256 369 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 MTA2O94776 668 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 TMCC1O94876 653 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 PROSCO94903 275 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms