RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FAM110AQ9BQ89 295 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 IFIH1Q9BYX4 1025 aaKnown RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 NUF2Q9BZD4 464 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 MAGEE1Q9HCI5 957 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 FZD3Q9NPG1 666 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 PLSCR4Q9NRQ2 329 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 PLK2Q9NYY3 685 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 CWC15Q9P013 229 aaKnown RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 MARCH4Q9P2E8 410 aaPredicted RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 UBA2Q9UBT2 640 aaPredicted RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ZNF215Q9UL58 517 aaPredicted RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ERVK-11Q9UQG0 969 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 A3GALT2U3KPV4 340 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TTBK1Q5TCY1 1321 aaPredicted RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SETD1BQ9UPS6 1966 aaKnown RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 RSF1Q96T23 1441 aaPredicted RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 LOC100509620A0A075B734 347 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 FRMD3A2A2Y4 597 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 KLRF2D3W0D1 207 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 HSPB6O14558 160 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 SLC25A17O43808 307 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 HS6ST1O60243 411 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ATP2C2O75185 946 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 SEC31AO94979 1220 aaKnown RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 OR2C1O95371 312 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 CLDN7O95471 211 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 FGBP02675 491 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ETFAP13804 333 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 CHRNB2P17787 502 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 MCM3P25205 808 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 MAPK4P31152 587 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 HOXC9P31274 260 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 AVPR1AP37288 418 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 HADHAP40939 763 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 MRPL12P52815 198 aaKnown RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 F2RL1P55085 397 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ITGADQ13349 1161 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 NTRK2Q16620 822 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ALG11Q2TAA5 492 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ESCO2Q56NI9 601 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 RAB41Q5JT25 222 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 Q5PR19 223 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 GKAP1Q5VSY0 366 aaPredicted RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 GPR139Q6DWJ6 353 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 PLEKHA7Q6IQ23 1121 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ZNF280DQ6N043 979 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 SLC30A6Q6NXT4 461 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 PARM1Q6UWI2 310 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 SEPT14Q6ZU15 432 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 DHX40Q8IX18 779 aaKnown RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 C17orf53Q8N3J3 647 aaPredicted RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ARFGAP1Q8N6T3 406 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 DPF1Q92782 380 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 EME1Q96AY2 570 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 COQ8BQ96D53 544 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 SLC41A2Q96JW4 573 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 YME1L1Q96TA2 773 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 SLC29A3Q9BZD2 475 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 GLIS2Q9BZE0 524 aaPredicted RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 FTOQ9C0B1 505 aaKnown RBP eCLIP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 PDZD7Q9H5P4 517 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 MVB12BQ9H7P6 319 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 MAP6D1Q9H9H5 199 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 KIF9Q9HAQ2 790 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 KRCC1Q9NPI7 259 aaPredicted RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 ANKEF1Q9NU02 776 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 GIMAP4Q9NUV9 329 aa3.14□□□□□ -1.91
HDAC6-212ENST00000461608 MRPL15Q9P015 296 aaKnown RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 SUCLA2Q9P2R7 463 aaPredicted RBP3.14□□□□□ -1.91
HDAC6-212ENST00000461608 GLOD5A6NK44 160 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 AKR1B15C9JRZ8 316 aaPredicted RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CHL1O00533 1208 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 WNT9BO14905 357 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 TP73O15350 636 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CELA2AP08217 269 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CLTBP09497 229 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 IL11P20809 199 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 KELP23276 732 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 ACTN2P35609 894 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 EIF2DP41214 584 aaKnown RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 GARSP41250 739 aaKnown RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 ARHGAP25P42331 645 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 SLC15A1P46059 708 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 PLCD1P51178 756 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 MRPS34P82930 218 aaKnown RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CEBPZQ03701 1054 aaKnown RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 GRIK3Q13003 919 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 MTX1Q13505 466 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 NEDD9Q14511 834 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 LPIN1Q14693 890 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 ARHGEF6Q15052 776 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 NAB2Q15742 525 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 DUSP6Q16828 381 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 ASTE1Q2TB18 679 aaPredicted RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 ZSCAN23Q3MJ62 389 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 PPP6R3Q5H9R7 873 aaPredicted RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CXorf66Q5JRM2 361 aaPredicted RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CES5AQ6NT32 575 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CACNA2D4Q7Z3S7 1137 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 YTHDF3Q7Z739 585 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms