RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 PCDH19Q8TAB3 1148 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 WDR48Q8TAF3 677 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 KCNE4Q8WWG9 221 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 ECHDC3Q96DC8 303 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 SLC46A1Q96NT5 459 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 EIF3CQ99613 913 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 CCDC3Q9BQI4 270 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 APOOQ9BUR5 198 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 SNRNP25Q9BV90 132 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 DPH1Q9BZG8 443 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 EDEM3Q9BZQ6 932 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 TRIM7Q9C029 511 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 ATP13A3Q9H7F0 1226 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 CPNE5Q9HCH3 593 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 THSD1Q9NS62 852 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 GULP1Q9UBP9 304 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 PCSK1NQ9UHG2 260 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 ATP8A1Q9Y2Q0 1164 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 OR1A2Q9Y585 309 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 PCDHGA8Q9Y5G5 932 aa8.85□□□□□ -0.99
SOX2-OT-202ENST00000461063 TENM4Q6N022 2769 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 ZNF462Q96JM2 2506 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 CFAP69A5D8W1 941 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 DFFAO00273 331 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 NTN3O00634 580 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 TRAFD1O14545 582 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 KLK10O43240 276 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 DAPK3O43293 454 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 PCCBP05166 539 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 ALPIP09923 528 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 CTSEP14091 401 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 ERCC2P18074 760 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 SERPINA4P29622 427 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 MIPP30301 263 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 ANP32AP39687 249 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 UCNP55089 124 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 SRP54P61011 504 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 SKOR1P84550 965 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 TYRO3Q06418 890 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 BCL2L1Q07817 233 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 NSUN2Q08J23 767 aaKnown RBP eCLIP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 C19orf57Q0VDD7 668 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 RALGDSQ12967 914 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 MTM1Q13496 603 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 RFTN1Q14699 578 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 TSR1Q2NL82 804 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 PPP6R3Q5H9R7 873 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 CCDC183Q5T5S1 534 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 BROXQ5VW32 411 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 E4F1Q66K89 784 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 ARHGAP36Q6ZRI8 547 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 ZNF571Q7Z3V5 609 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 RD3Q7Z3Z2 195 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 PSTKQ8IV42 348 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 SDR16C5Q8N3Y7 309 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 KYQ8NBH2 561 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 PLA2G15Q8NCC3 412 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 SCG3Q8WXD2 468 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 PDXPQ96GD0 296 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 NSMCE3Q96MG7 304 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 WDR92Q96MX6 357 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 CINPQ9BW66 212 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 SIRPGQ9P1W8 387 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 KLQ9UEF7 1012 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 GPR34Q9UPC5 381 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 DOLKQ9UPQ8 538 aa8.84□□□□□ -0.99
SOX2-OT-202ENST00000461063 COL27A1Q8IZC6 1860 aaPredicted RBP8.83□□□□□ -1
SOX2-OT-202ENST00000461063 CCDC187A0A096LP49 1063 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 TMEM202A6NGA9 273 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 CDRT15L2A8MXV6 281 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 DDX3XO00571 662 aaKnown RBP eCLIP8.83□□□□□ -1
SOX2-OT-202ENST00000461063 PRPSAP2O60256 369 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 LRCH4O75427 683 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 RNF8O76064 485 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 RECQL5O94762 991 aaPredicted RBP8.83□□□□□ -1
SOX2-OT-202ENST00000461063 TNFSF15O95150 251 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 TNFP01375 233 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 FTLP02792 175 aaPredicted RBP8.83□□□□□ -1
SOX2-OT-202ENST00000461063 HCAR3P49019 387 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 KIAA1024LP59773 190 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 POLR2LP62875 67 aaKnown RBP8.83□□□□□ -1
SOX2-OT-202ENST00000461063 IL10RBQ08334 325 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 DPYSQ14117 519 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 SPIDRQ14159 915 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 ASIC2Q16515 512 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 ANO6Q4KMQ2 910 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 ARHGAP40Q5TG30 622 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 FOXR1Q6PIV2 292 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 LIPIQ6XZB0 460 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 DPPA4Q7L190 304 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 B3GNT8Q7Z7M8 397 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 GKN2Q86XP6 184 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 TP53INP2Q8IXH6 220 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 ZNF843Q8N446 348 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 ARL14Q8N4G2 192 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 ATL2Q8NHH9 583 aa8.83□□□□□ -1
SOX2-OT-202ENST00000461063 WDR36Q8NI36 951 aaKnown RBP8.83□□□□□ -1
SOX2-OT-202ENST00000461063 FNIP1Q8TF40 1166 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms