RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 MAP1BP46821 2468 aaKnown RBP13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 GOLGA6L9A6NEM1 432 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 A6NNZ2 444 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HACD1B0YJ81 288 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MTSS1O43312 755 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 RFPL3O75679 317 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 DKK1O94907 266 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PIGNO95427 931 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 JCHAINP01591 159 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ALPPL2P10696 532 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PRLRP16471 622 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ELP6Q0PNE2 266 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ILKQ13418 452 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 LLGL1Q15334 1064 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NPNTQ6UXI9 565 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 BBS12Q6ZW61 710 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PARS2Q7L3T8 475 aaKnown RBP13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TMPRSS12Q86WS5 348 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TMEM145Q8NBT3 493 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TRIM58Q8NG06 486 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HES6Q96HZ4 224 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MYOCQ99972 504 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 C1QTNF7Q9BXJ2 289 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 POLR1EQ9GZS1 481 aaKnown RBP13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 EVA1BQ9NVM1 165 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 FADS3Q9Y5Q0 445 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CAPN6Q9Y6Q1 641 aa13.34□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CABIN1Q9Y6J0 2220 aa13.33□□□□□ -0.27
RAB11FIP3-207ENST00000461009 EPG5Q9HCE0 2579 aa13.33□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NEMP2A6NFY4 417 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 APOC4-APOC2K7ER74 178 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 RNF103O00237 685 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 FPGTO14772 594 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 MUSKO15146 869 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SOCS5O75159 536 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ZNF189O75820 626 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PAK4O96013 591 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 APOC2P02655 101 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PYGMP11217 842 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 JUPP14923 745 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 TIMP2P16035 220 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CR2P20023 1033 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CA4P22748 312 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 RGRP47804 291 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 MAXP61244 160 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 IFI35P80217 286 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 BNIP3Q12983 259 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 XRCC4Q13426 336 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 RPS6KA1Q15418 735 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SHBQ15464 509 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SMAD1Q15797 465 aaKnown RBP13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SEL1L3Q68CR1 1132 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 DHRS13Q6UX07 377 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CAMK1DQ8IU85 385 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 NDUFAF2Q8N183 169 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PGBD5Q8N414 524 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PDCD7Q8N8D1 485 aaKnown RBP13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 TTC13Q8NBP0 860 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ALG3Q92685 438 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 IFT43Q96FT9 208 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 OLFM3Q96PB7 478 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SEMA3CQ99985 751 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 NOD2Q9HC29 1040 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PACSIN2Q9UNF0 486 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 TTLL3Q9Y4R7 772 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 DOCK9Q9BZ29 2069 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 KNL1Q8NG31 2342 aa13.33□□□□□ -0.28
RAB11FIP3-207ENST00000461009 TSPAN11A1L157 253 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 H3BM21 787 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 H7C0C1 242 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 KCNK1O00180 336 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 DDX3YO15523 660 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CKMT2P17540 419 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 RABIFP47224 123 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ATP5OP48047 213 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ZNF211Q13398 564 aaPredicted RBP13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 UGP2Q16851 508 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 TMEM259Q4ZIN3 620 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SEL1L2Q5TEA6 688 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 Q6ZSR6 202 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PTAR1Q7Z6K3 402 aaPredicted RBP13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CXorf40AQ8TE69 158 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PDCD6IPQ8WUM4 868 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 HAUS1Q96CS2 278 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 LENG8Q96PV6 779 aaPredicted RBP13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 IL12RB2Q99665 862 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 FZD3Q9NPG1 666 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SEPT10Q9P0V9 454 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SAE1Q9UBE0 346 aaPredicted RBP13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ZFR2Q9UPR6 939 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CA5BQ9Y2D0 317 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ATP8A1Q9Y2Q0 1164 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PCDHGC4Q9Y5F7 938 aa13.32□□□□□ -0.28
RAB11FIP3-207ENST00000461009 TP53BP1Q12888 1972 aaPredicted RBP13.31□□□□□ -0.28
RAB11FIP3-207ENST00000461009 HTRA2O43464 458 aaPredicted RBP13.31□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SDC3O75056 442 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms