RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TSPAN6O43657 245 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 JCHAINP01591 159 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3HP0C7X1 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 XPAP23025 273 aaPredicted RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 ITPKAP23677 461 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 NFKBIAP25963 317 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 MAXP61244 160 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 POLR2LP62875 67 aaKnown RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 ITKQ08881 620 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 ELP6Q0PNE2 266 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 SLC14A2Q15849 920 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3GQ6DHY5 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3CQ6IPX1 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 KIAA1161Q6NSJ0 714 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 AADACL2Q6P093 401 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 ERAP2Q6P179 960 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 CAMK1DQ8IU85 385 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3Q8IZP1 549 aaPredicted RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 CEP76Q8TAP6 659 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 BIRC7Q96CA5 298 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 SEMA3CQ99985 751 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 EPN3Q9H201 632 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 ARRDC1-AS1Q9H2J1 176 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 SEPT10Q9P0V9 454 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TTLL3Q9Y4R7 772 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 FADS3Q9Y5Q0 445 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 NUMA1Q14980 2115 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 WDR87Q6ZQQ6 2873 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 SDK1Q7Z5N4 2213 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 TNRC6BQ9UPQ9 1833 aaKnown RBP11.16□□□□□ -0.62
APTX-209ENST00000460940 H7C0C1 242 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 AREL1O15033 823 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 IGHV4-34P06331 123 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 SERPINF2P08697 491 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 GNSP15586 552 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 PTPN3P26045 913 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 CD27P26842 260 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 ABL2P42684 1182 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 ATP5OP48047 213 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 EIF3EP60228 445 aaKnown RBP11.16□□□□□ -0.62
APTX-209ENST00000460940 SETDB1Q15047 1291 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 UGP2Q16851 508 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 SETMARQ53H47 684 aaPredicted RBP11.16□□□□□ -0.62
APTX-209ENST00000460940 TEX44Q53QW1 395 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 PAPD7Q5XG87 772 aaKnown RBP11.16□□□□□ -0.62
APTX-209ENST00000460940 KDM7AQ6ZMT4 941 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 TTC7BQ86TV6 843 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 ZC3H18Q86VM9 953 aaKnown RBP11.16□□□□□ -0.62
APTX-209ENST00000460940 RGL4Q8IZJ4 473 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 DEFB119Q8N690 84 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 HTR3CQ8WXA8 447 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 SNX19Q92543 992 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 PIGKQ92643 395 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 DMTF1Q9Y222 760 aa11.16□□□□□ -0.62
APTX-209ENST00000460940 PRR5-ARHGAP8B1AHC4 643 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 NEMP1O14524 444 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 RNGTTO60942 597 aaKnown RBP11.15□□□□□ -0.62
APTX-209ENST00000460940 GJB3O75712 270 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 STK10O94804 968 aaKnown RBP11.15□□□□□ -0.62
APTX-209ENST00000460940 TIMP2P16035 220 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 PPP2CBP62714 309 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 RPS21P63220 83 aaKnown RBP11.15□□□□□ -0.62
APTX-209ENST00000460940 PPP2CAP67775 309 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 WASHC5Q12768 1159 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 SLMAPQ14BN4 828 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 CSRP2Q16527 193 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 TTC19Q6DKK2 380 aaPredicted RBP11.15□□□□□ -0.62
APTX-209ENST00000460940 CCDC70Q6NSX1 233 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 C6orf89Q6UWU4 347 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 PRPF39Q86UA1 669 aaKnown RBP11.15□□□□□ -0.62
APTX-209ENST00000460940 HORMAD1Q86X24 394 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 SLC13A5Q86YT5 568 aaPredicted RBP11.15□□□□□ -0.62
APTX-209ENST00000460940 CNTD1Q8N815 330 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 ARRDC2Q8TBH0 407 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 MAIP1Q8WWC4 291 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 TEKT5Q96M29 485 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 SLC25A51Q9H1U9 297 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 TRHDEQ9UKU6 1024 aa11.15□□□□□ -0.62
APTX-209ENST00000460940 A0A1B0GTW7 788 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 A0A1W2PPC4 97 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 A0A1W2PQU0 124 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 SPINT1O43278 529 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 PCDH8O95206 1070 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 PGLSO95336 258 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 ZNF806P0C7X5 589 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 RBP3P10745 1247 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 TNFRSF8P28908 595 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 MMP12P39900 470 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 RPL26P61254 145 aaKnown RBP11.15□□□□□ -0.63
APTX-209ENST00000460940 DSC2Q02487 901 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 TRAF2Q12933 501 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 DUOXA1Q1HG43 343 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 TMEM259Q4ZIN3 620 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 ARMC12Q5T9G4 340 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 CYB5D1Q6P9G0 228 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms