RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RHOBTB3O94955 611 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 CD1AP06126 327 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC159P0C7I6 412 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TGM1P22735 817 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 DNAJB1P25685 340 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 HNRNPH1P31943 449 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 STIP1P31948 543 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC11A1P49279 550 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PSMD7P51665 324 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 RPS16P62249 146 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 HTRA4P83105 476 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 CREMQ03060 361 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TFF2Q03403 129 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 BLMHQ13867 455 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 DPCR1Q3MIW9 517 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 KBTBD12Q3ZCT8 623 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 FKBP15Q5T1M5 1219 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 EMC10Q5UCC4 262 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 C1QL3Q5VWW1 255 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ANKRD40Q6AI12 368 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 C11orf57Q6ZUT1 292 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 MICALCLQ6ZW33 695 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 RHOUQ7L0Q8 258 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF572Q7Z3I7 529 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 MRGPREQ86SM8 312 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PLXDC1Q8IUK5 500 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 IL17RDQ8NFM7 739 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 MDGA1Q8NFP4 955 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 SPATA20Q8TB22 786 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM81AQ8TBF8 368 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 POMGNT1Q8WZA1 660 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 N4BP2L2Q92802 583 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 APBB2Q92870 758 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF566Q969W8 418 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PPP1R14BQ96C90 147 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF689Q96CS4 500 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 THOC1Q96FV9 657 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 RAD9AQ99638 391 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TTPALQ9BTX7 342 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TIPINQ9BVW5 301 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 VN1R3Q9BXE9 311 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 FTHL17Q9BXU8 183 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 MAK16Q9BXY0 300 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 NFKBIZQ9BYH8 718 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 DPH1Q9BZG8 443 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 C11orf54Q9H0W9 315 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 CWH43Q9H720 699 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 NRDE2Q9H7Z3 1164 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 MAGEF1Q9HAY2 307 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PDE11AQ9HCR9 933 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 SLAMF7Q9NQ25 335 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 SERHLQ9NQF3 203 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 OLFML3Q9NRN5 406 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 AGPAT3Q9NRZ7 376 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TMEM161AQ9NX61 479 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TUBA8Q9NY65 449 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 AGO2Q9UKV8 859 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ZDHHC8Q9ULC8 765 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PTPRZ1P23471 2315 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF292O60281 2723 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PDCD11Q14690 1871 aaKnown RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 NCOR2Q9Y618 2525 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 GPR179Q6PRD1 2367 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 COL4A4P53420 1690 aaPredicted RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 SMIM28A0A1B0GU29 152 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 OGTO15294 1046 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CLDN3O15551 220 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 HCRTO43612 131 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 TIMM44O43615 452 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 LPXNO60711 386 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 ZC3H11AO75152 810 aaKnown RBP eCLIP5□□□□□ -1.61
ATPAF1-203ENST00000460928 TOM1L1O75674 476 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 IPO13O94829 963 aaKnown RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 MATN4O95460 622 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 PIGRP01833 764 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CSTBP04080 98 aaKnown RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 NR3C1P04150 777 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 SBK3P0C264 359 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 TRIM49P0CI25 452 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 TRIM49CP0CI26 452 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 RAP2AP10114 183 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 MCF2P10911 925 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 ALOX15P16050 662 aaPredicted RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 EEF1GP26641 437 aaKnown RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 CTNNB1P35222 781 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 GCKP35557 465 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CASRP41180 1078 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 BRCC3P46736 316 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 ALDH1A3P47895 512 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 TUBB4BP68371 445 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 APBA1Q02410 837 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC15Q0P6D6 951 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CAMK1Q14012 370 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 KCNB1Q14721 858 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 NAB2Q15742 525 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 KNOP1Q1ED39 458 aaKnown RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 BMT2Q1RMZ1 405 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 PABPC1LQ4VXU2 614 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms