RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 PDZD3Q86UT5 571 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 SDR16C5Q8N3Y7 309 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 FSTL5Q8N475 847 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 MAPK15Q8TD08 544 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 GLMNQ92990 594 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 BTBD6Q96KE9 485 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 NUDCD1Q96RS6 583 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 ABCG4Q9H172 646 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 RCOR3Q9P2K3 495 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 NENFQ9UMX5 172 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 OR1A2Q9Y585 309 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 PCDHB1Q9Y5F3 818 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 ASXL3Q9C0F0 2248 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 CPED1A4D0V7 1026 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 MYO1FO00160 1098 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 HTRA2O43464 458 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 RECQL5O94762 991 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 RASGRP1O95267 797 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ANXA6P08133 673 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ALPIP09923 528 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 GM2AP17900 193 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 TGM2P21980 687 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 IL4RP24394 825 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 HNRNPH3P31942 346 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 CASP14P31944 242 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ACTN2P35609 894 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 CDH6P55285 790 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 KIAA1024LP59773 190 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ELOCQ15369 112 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 NR0B2Q15466 257 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 RALGPS1Q5JS13 557 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 CCDC122Q5T0U0 273 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 LVRNQ6Q4G3 990 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ENPP7Q6UWV6 458 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 EFL1Q7Z2Z2 1120 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 HID1Q8IV36 788 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 SLC35F3Q8IY50 421 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 PGBD5Q8N414 524 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ATPAF2Q8N5M1 289 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 ATL2Q8NHH9 583 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 SNIP1Q8TAD8 396 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 TSACCQ96A04 125 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 WDR92Q96MX6 357 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 MGME1Q9BQP7 344 aa11.86□□□□□ -0.51
SOX2-OT-201ENST00000460739 RP1P56715 2156 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 TTC24A2A3L6 582 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 USP12O75317 370 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 CSO75390 466 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 PCCBP05166 539 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 CELA2BP08218 269 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 HOXC4P09017 264 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 CTSEP14091 401 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 TRIM23P36406 574 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 ABCG1P45844 678 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 ARSEP51690 589 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 SRP54P61011 504 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 KRT81Q14533 505 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 HADHQ16836 314 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 TBC1D25Q3MII6 688 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 PERM1Q5SV97 790 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 MARC1Q5VT66 337 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 ESRP1Q6NXG1 681 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 LRRC49Q8IUZ0 686 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 BBS5Q8N3I7 341 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 PAF1Q8N7H5 531 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 ZNF564Q8TBZ8 553 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 SCG3Q8WXD2 468 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 FGF11Q92914 225 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 NAT6Q93015 286 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 FUBP1Q96AE4 644 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 GRAMD1AQ96CP6 724 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 COQ10AQ96MF6 247 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 XPO4Q9C0E2 1151 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 NOD2Q9HC29 1040 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 B4GALT6Q9UBX8 382 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 KLQ9UEF7 1012 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 PCDHGC4Q9Y5F7 938 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 DGKBQ9Y6T7 804 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 LOC400499M0QZD8 3231 aa11.85□□□□□ -0.51
SOX2-OT-201ENST00000460739 TMEM202A6NGA9 273 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 A8MX80 341 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 CACNB4O00305 520 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 RRP8O43159 456 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 TCEA3O75764 348 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 DXOO77932 396 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 PROSCO94903 275 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 CPP00450 1065 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 TPM3P06753 285 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 CD48P09326 243 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 HOXB3P14651 431 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 MMP13P45452 471 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 LSSP48449 732 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms