RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ALADP13716 330 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 CSNK1DP48730 415 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 ITPRIPL2Q3MIP1 535 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 MROH9Q5TGP6 573 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 EMC10Q5UCC4 262 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
NELFCD-201ENST00000460601 MTSS1LQ765P7 747 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 CROCCP2Q86T23 111 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 TRABD2AQ86V40 505 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 C4orf33Q8N1A6 199 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 MDM1Q8TC05 714 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 BRSK1Q8TDC3 778 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 PTCD2Q8WV60 388 aaKnown RBP16.91■□□□□ 0.3
NELFCD-201ENST00000460601 EID2BQ96D98 161 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 RANBP9Q96S59 729 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 MRM3Q9HC36 420 aaKnown RBP16.91■□□□□ 0.3
NELFCD-201ENST00000460601 LIMD1Q9UGP4 676 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 PLA2G4CQ9UP65 541 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 MUC3AQ02505 3323 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 CXorf51AA0A1B0GTR3 108 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 KAT7O95251 611 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 ASGR2P07307 311 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 NNMTP40261 264 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 CTBP1Q13363 440 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 RALGPS1Q5JS13 557 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 IER5LQ5T953 404 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 MARK2Q7KZI7 788 aaKnown RBP16.91■□□□□ 0.3
NELFCD-201ENST00000460601 RIBC1Q8N443 379 aaPredicted RBP16.91■□□□□ 0.3
NELFCD-201ENST00000460601 WFIKKN2Q8TEU8 576 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 CDKL2Q92772 493 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 TBATAQ96M53 351 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 GUCD1Q96NT3 240 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 ACOX2Q99424 681 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 BPIFA1Q9NP55 256 aa16.91■□□□□ 0.3
NELFCD-201ENST00000460601 FNDC3AQ9Y2H6 1198 aaKnown RBP16.91■□□□□ 0.3
NELFCD-201ENST00000460601 TCF20Q9UGU0 1960 aaKnown RBP16.9■□□□□ 0.3
NELFCD-201ENST00000460601 GSRP00390 522 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 SERPINA4P29622 427 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 ZNF234Q14588 700 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 TXNDC11Q6PKC3 985 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 PACS1Q6VY07 963 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-201ENST00000460601 LDB1Q86U70 411 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-201ENST00000460601 HDAC10Q969S8 669 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 SERAC1Q96JX3 654 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 MUC22E2RYF6 1773 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-201ENST00000460601 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-201ENST00000460601 LEFTY1O75610 366 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 PRSS56P0CW18 603 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 METAP1P53582 386 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 PGGT1BP53609 377 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 MPP1Q00013 466 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 FNDC3BQ53EP0 1204 aaKnown RBP16.9■□□□□ 0.3
NELFCD-201ENST00000460601 PDPK2PQ6A1A2 396 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 STRA8Q7Z7C7 330 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 OR4K2Q8NGD2 314 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 SELENOSQ9BQE4 189 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 PPCSQ9HAB8 311 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 KCNK12Q9HB15 430 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 ADAM21Q9UKJ8 722 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 WASF2Q9Y6W5 498 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 USP34Q70CQ2 3546 aa16.9■□□□□ 0.3
NELFCD-201ENST00000460601 F5P12259 2224 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 GOLGA8CPA6NN73 597 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 TRIM49D1C9J1S8 452 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 GPR39O43194 453 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 SOCS5O75159 536 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 SPAG7O75391 227 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 POP4O95707 220 aaKnown RBP16.89■□□□□ 0.29
NELFCD-201ENST00000460601 FOSL2P15408 326 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 KRT4P19013 534 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 GABRB3P28472 473 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 SLC1A2P43004 574 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 MAPK8P45983 427 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 ZNF140P52738 457 aaPredicted RBP16.89■□□□□ 0.29
NELFCD-201ENST00000460601 RASA2Q15283 850 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 ARSIQ5FYB1 569 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 ZNF470Q6ECI4 717 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 KIAA0930Q6ICG6 404 aaPredicted RBP16.89■□□□□ 0.29
NELFCD-201ENST00000460601 LYSMD3Q7Z3D4 306 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 ACVR1CQ8NER5 493 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 OR6P1Q8NGX9 317 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 KLHL32Q96NJ5 620 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 SUV39H2Q9H5I1 410 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 POLR3BQ9NW08 1133 aaPredicted RBP16.89■□□□□ 0.29
NELFCD-201ENST00000460601 ATG2BQ96BY7 2078 aa16.89■□□□□ 0.29
NELFCD-201ENST00000460601 A0A0J9YYE9 177 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 TRBC1P01850 177 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 ASLP04424 464 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 SRPRAP08240 638 aaKnown RBP16.88■□□□□ 0.29
NELFCD-201ENST00000460601 CA4P22748 312 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 RECQLP46063 649 aaPredicted RBP16.88■□□□□ 0.29
NELFCD-201ENST00000460601 GRIA4P48058 902 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 ST8SIA6P61647 398 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 PPP2R2AP63151 447 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 SMAD4Q13485 552 aaKnown RBP16.88■□□□□ 0.29
NELFCD-201ENST00000460601 MPP2Q14168 576 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 ZNF789Q5FWF6 425 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 EGFLAMQ63HQ2 1017 aa16.88■□□□□ 0.29
NELFCD-201ENST00000460601 TSPAN33Q86UF1 283 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms