RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 KCNK12Q9HB15 430 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 THG1LQ9NWX6 298 aaKnown RBP14.4□□□□□ -0.1
PCNP-202ENST00000460231 CACNA2D2Q9NY47 1150 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 PSMC3IPQ9P2W1 217 aaPredicted RBP14.4□□□□□ -0.1
PCNP-202ENST00000460231 SLC25A13Q9UJS0 675 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 COL4A2P08572 1712 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 NPIPB15A6NHN6 443 aaPredicted RBP14.4□□□□□ -0.1
PCNP-202ENST00000460231 ECI2O75521 394 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 LEFTY1O75610 366 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 EPOP01588 193 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 HLA-DPA1P20036 260 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 NR1D1P20393 614 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 CD72P21854 359 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 IL12RB1P42701 662 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 MSH2P43246 934 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 ZNF140P52738 457 aaPredicted RBP14.4□□□□□ -0.1
PCNP-202ENST00000460231 GUCY1A3Q02108 690 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 CDKN3Q16667 212 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 CARD16Q5EG05 197 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 ARSIQ5FYB1 569 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 SPANXN3Q5MJ09 141 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 PACS1Q6VY07 963 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 CDHR3Q6ZTQ4 885 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 CEP128Q6ZU80 1094 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 SH2D5Q6ZV89 423 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 PTAR1Q7Z6K3 402 aaPredicted RBP14.4□□□□□ -0.1
PCNP-202ENST00000460231 MTERF4Q7Z6M4 381 aaKnown RBP14.4□□□□□ -0.1
PCNP-202ENST00000460231 TDRPQ86YL5 185 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 YAF2Q8IY57 180 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 PPHLN1Q8NEY8 458 aaKnown RBP14.4□□□□□ -0.1
PCNP-202ENST00000460231 HEBP1Q9NRV9 189 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 NUMA1Q14980 2115 aa14.4□□□□□ -0.1
PCNP-202ENST00000460231 DOCK9Q9BZ29 2069 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 TMEM265A0A087WTH1 108 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 TBC1D3BA6NDS4 549 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 GOLGA6L10A6NI86 522 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 KAT7O95251 611 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 FGF1P05230 155 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
PCNP-202ENST00000460231 TSHRP16473 764 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 LHCGRP22888 699 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 HNF1BP35680 557 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 SLC1A2P43004 574 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 GALK1P51570 392 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 SEC13P55735 322 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 BCL2L1Q07817 233 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 KLHL38Q2WGJ6 581 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 AGBL2Q5U5Z8 902 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 GRAMD4Q6IC98 578 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 OR4K2Q8NGD2 314 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 FUBP1Q96AE4 644 aaKnown RBP14.39□□□□□ -0.11
PCNP-202ENST00000460231 BRD9Q9H8M2 597 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 ADAM21Q9UKJ8 722 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 SCN8AQ9UQD0 1980 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 HMGB1P1B2RPK0 211 aaPredicted RBP14.39□□□□□ -0.11
PCNP-202ENST00000460231 TRIM49D1C9J1S8 452 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 CLDN7O95471 211 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 IGSF6O95976 241 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 AHSGP02765 367 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 ALDOAP04075 364 aaKnown RBP14.39□□□□□ -0.11
PCNP-202ENST00000460231 AP1S1P61966 158 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 MGAT5Q09328 741 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 LRRC14Q15048 493 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 PPM1JQ5JR12 505 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 CMC1Q7Z7K0 106 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 SLC26A11Q86WA9 606 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 STK40Q8N2I9 435 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 TTC30BQ8N4P2 665 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 DEFB123Q8N688 67 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 KLHL32Q96NJ5 620 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 RABEP2Q9H5N1 569 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 FAM96AQ9H5X1 160 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 ZFATQ9P243 1243 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 SLC24A2Q9UI40 661 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 ITM2BQ9Y287 266 aa14.39□□□□□ -0.11
PCNP-202ENST00000460231 CCDC162PA2VCL2 907 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 K7EQS6 105 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 SPAG6O75602 509 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 RFPL1O75677 317 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 IL9P15248 144 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 KRT15P19012 456 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 KRT4P19013 534 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 SLC20A2Q08357 652 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 ZNF460Q14592 562 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 ITPRIPL2Q3MIP1 535 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 C9orf64Q5T6V5 341 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 ARMC12Q5T9G4 340 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 ZNF470Q6ECI4 717 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 MARK2Q7KZI7 788 aaKnown RBP14.38□□□□□ -0.11
PCNP-202ENST00000460231 GLT6D1Q7Z4J2 308 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 STRA8Q7Z7C7 330 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 PIANPQ8IYJ0 282 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 SLC44A3Q8N4M1 653 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 CPA6Q8N4T0 437 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 BRSK1Q8TDC3 778 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
PCNP-202ENST00000460231 ECHDC3Q96DC8 303 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 TMEM245Q9H330 911 aa14.38□□□□□ -0.11
PCNP-202ENST00000460231 FBXO6Q9NRD1 293 aaPredicted RBP14.38□□□□□ -0.11
PCNP-202ENST00000460231 GRID1Q9ULK0 1009 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms