RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 H3BM21 787 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 GCATO75600 419 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 GAS8O95995 478 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 TRBC1P01850 177 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 FAM193AP78312 1265 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 PDE1BQ01064 536 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 ZBTB17Q13105 803 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 ZNF211Q13398 564 aaPredicted RBP10.75□□□□□ -0.69
UBR4-208ENST00000459947 PEX6Q13608 980 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 PARP6Q2NL67 630 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 KIF2AO00139 706 aaPredicted RBP10.75□□□□□ -0.69
UBR4-208ENST00000459947 PGRMC1O00264 195 aaKnown RBP10.75□□□□□ -0.69
UBR4-208ENST00000459947 SLC30A4O14863 429 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 KCNN4O15554 427 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 CEP104O60308 925 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 HEXIM1O94992 359 aaKnown RBP10.75□□□□□ -0.69
UBR4-208ENST00000459947 CD86P42081 329 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 MAXP61244 160 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 PPP2CBP62714 309 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 PPP2CAP67775 309 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 WASHC5Q12768 1159 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 ABI3BPQ7Z7G0 1075 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 LINC00523Q86TU6 105 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 PDCD6IPQ8WUM4 868 aaKnown RBP10.75□□□□□ -0.69
UBR4-208ENST00000459947 AGAP3Q96P47 875 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 PAK5Q9P286 719 aa10.75□□□□□ -0.69
UBR4-208ENST00000459947 CACNA1HO95180 2353 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 MUC6Q6W4X9 2439 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ITGAVP06756 1048 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 LRRC14Q15048 493 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 LONRF2Q1L5Z9 754 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 SDR16C5Q8N3Y7 309 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 RASGEF1CQ8N431 466 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 FRMD1Q8N878 549 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 BTN2A2Q8WVV5 523 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 MAGEE1Q9HCI5 957 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 CD93Q9NPY3 652 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 PACSIN2Q9UNF0 486 aaPredicted RBP10.74□□□□□ -0.69
UBR4-208ENST00000459947 A0A1W2PR77 199 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 PPFIA2O75334 1257 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 TSHRP16473 764 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 HTR1BP28222 390 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 RBL1P28749 1068 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 GKP32189 559 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 CTSKP43235 329 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 BLKP51451 505 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 NIPAL4Q0D2K0 466 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ANKRD20A2Q5SQ80 823 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ANKRD20A1Q5TYW2 823 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ANKRD20A3Q5VUR7 823 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 PDPK2PQ6A1A2 396 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ZNF567Q8N184 647 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 DEFB119Q8N690 84 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 CNTD1Q8N815 330 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 TMEM145Q8NBT3 493 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 DTX3LQ8TDB6 740 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 PIH1D2Q8WWB5 315 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 PHOX2BQ99453 314 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 NAPGQ99747 312 aaPredicted RBP10.74□□□□□ -0.69
UBR4-208ENST00000459947 FSD1LQ9BXM9 530 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 SLC32A1Q9H598 525 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 B4GALT6Q9UBX8 382 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 PCDHGC4Q9Y5F7 938 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ANKRD36A6QL64 1941 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 TLR4O00206 839 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 C6P13671 934 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ENGP17813 658 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 NFKB1P19838 968 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 RXRGP48443 463 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 KIAA1024LP59773 190 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 LIPIQ6XZB0 460 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 KLHDC8BQ8IXV7 354 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 SLC35F6Q8N357 371 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 CCDC89Q8N998 374 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 LPCAT1Q8NF37 534 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 RMDN1Q96DB5 314 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 ORAI3Q9BRQ5 295 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 LRRC40Q9H9A6 602 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 RALGAPA1Q6GYQ0 2036 aa10.74□□□□□ -0.69
UBR4-208ENST00000459947 PLK4O00444 970 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 LIASO43766 372 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 MAP3K6O95382 1288 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 LIG3P49916 1009 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 NXPH1P58417 271 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 ACTRT1Q8TDG2 376 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 SLC6A18Q96N87 628 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 PARD6AQ9NPB6 346 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 PHPT1Q9NRX4 125 aaPredicted RBP10.73□□□□□ -0.69
UBR4-208ENST00000459947 ZFR2Q9UPR6 939 aaKnown RBP10.73□□□□□ -0.69
UBR4-208ENST00000459947 ZNF148Q9UQR1 794 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 ANKRD6Q9Y2G4 727 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 CTAGE9A4FU28 777 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 IGLON5A6NGN9 336 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 WNT9AO14904 365 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 THOP1P52888 689 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 GRIK2Q13002 908 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 ACOX1Q15067 660 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 NETO2Q8NC67 525 aa10.73□□□□□ -0.69
UBR4-208ENST00000459947 TRIM44Q96DX7 344 aaPredicted RBP10.73□□□□□ -0.69
UBR4-208ENST00000459947 NUS1Q96E22 293 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms