RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 RNF157Q96PX1 679 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 POLR1EQ9GZS1 481 aaKnown RBP16.2■□□□□ 0.18
COL7A1-203ENST00000459756 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 KLF15Q9UIH9 416 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 CACNA1BQ00975 2339 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 AQP9O43315 295 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 CPP00450 1065 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 CES1P23141 567 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 MAGEA1P43355 309 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 DAB2P98082 770 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 GBE1Q04446 702 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 MTM1Q13496 603 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 INPP5AQ14642 412 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 CCDC170Q8IYT3 715 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 FAM181AQ8N9Y4 354 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 ATL2Q8NHH9 583 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 PDCD6IPQ8WUM4 868 aaKnown RBP16.19■□□□□ 0.18
COL7A1-203ENST00000459756 ZCCHC14Q8WYQ9 949 aaKnown RBP16.19■□□□□ 0.18
COL7A1-203ENST00000459756 MRFAP1L1Q96HT8 127 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 ZNF830Q96NB3 372 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-203ENST00000459756 CAAP1Q9H8G2 361 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 USP29Q9HBJ7 922 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 NT5MQ9NPB1 228 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 EVA1BQ9NVM1 165 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 SPASTQ9UBP0 616 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 B4GALT6Q9UBX8 382 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 PHTF1Q9UMS5 762 aa16.19■□□□□ 0.18
COL7A1-203ENST00000459756 DMXL2Q8TDJ6 3036 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 K7ESM1 405 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 RECQL5O94762 991 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-203ENST00000459756 PGLSO95336 258 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 MAP3K6O95382 1288 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 LCA5LO95447 670 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 CKMT1AP12532 417 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 CCNB1P14635 433 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 HTR1BP28222 390 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 HNF1BP35680 557 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 ZNF75DP51815 510 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 HADHBP55084 474 aaKnown RBP16.18■□□□□ 0.18
COL7A1-203ENST00000459756 E2F1Q01094 437 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 PPARDQ03181 441 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 ITKQ08881 620 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 TRAF2Q12933 501 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 NFATC4Q14934 902 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 ARMC12Q5T9G4 340 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 FAXCQ5TGI0 409 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 ALG1LQ6GMV1 187 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 RHOT1Q8IXI2 618 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 PHACTR4Q8IZ21 702 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-203ENST00000459756 LMX1AQ8TE12 382 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 HDAC11Q96DB2 347 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 SEMA3CQ99985 751 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 APOOQ9BUR5 198 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 SLC13A1Q9BZW2 595 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 LUC7LQ9NQ29 371 aaKnown RBP16.18■□□□□ 0.18
COL7A1-203ENST00000459756 RBM22Q9NW64 420 aaKnown RBP eCLIP16.18■□□□□ 0.18
COL7A1-203ENST00000459756 DDX56Q9NY93 547 aaKnown RBP16.18■□□□□ 0.18
COL7A1-203ENST00000459756 DTLQ9NZJ0 730 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 NCKIPSDQ9NZQ3 722 aa16.18■□□□□ 0.18
COL7A1-203ENST00000459756 APOBEC3BQ9UH17 382 aaKnown RBP16.18■□□□□ 0.18
COL7A1-203ENST00000459756 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 C3orf70A6NLC5 250 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-203ENST00000459756 A8MX80 341 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 TPP1O14773 563 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 SPOPO43791 374 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 NEBLO76041 1014 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 PCCBP05166 539 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 CYP2A6P11509 494 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-203ENST00000459756 KRT10P13645 584 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 VIPR1P32241 457 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 BLKP51451 505 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 SLC10A2Q12908 348 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-203ENST00000459756 ACOX1Q15067 660 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 SPA17Q15506 151 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 PRRT3Q5FWE3 981 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 ZCCHC8Q6NZY4 707 aaKnown RBP16.17■□□□□ 0.18
COL7A1-203ENST00000459756 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 NDUFAF2Q8N183 169 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 CCNYQ8ND76 341 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 APOLD1Q96LR9 279 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 PANX2Q96RD6 677 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 IL12RB2Q99665 862 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 MAK16Q9BXY0 300 aaKnown RBP16.17■□□□□ 0.18
COL7A1-203ENST00000459756 KCTD5Q9NXV2 234 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 ZMIZ1Q9ULJ6 1067 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 PNMA8BQ9ULN7 279 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-203ENST00000459756 OR1A2Q9Y585 309 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 RAI2Q9Y5P3 530 aa16.17■□□□□ 0.18
COL7A1-203ENST00000459756 GOLGA4Q13439 2230 aaKnown RBP16.17■□□□□ 0.18
COL7A1-203ENST00000459756 FAM149AA5PLN7 773 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 LMO7DNF2Z398 122 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 APOL1O14791 398 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 KRT1P04264 644 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 CAPNS1P04632 268 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 JUPP14923 745 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 ZFXP17010 805 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 GM2AP17900 193 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms