RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 STAT4Q14765 748 aa8.78□□□□□ -1
RIF1-208ENST00000457745 SLC14A2Q15849 920 aa8.78□□□□□ -1
RIF1-208ENST00000457745 MYLK3Q32MK0 819 aa8.78□□□□□ -1
RIF1-208ENST00000457745 HSP90AA5PQ58FG0 334 aa8.78□□□□□ -1
RIF1-208ENST00000457745 CARD16Q5EG05 197 aa8.78□□□□□ -1
RIF1-208ENST00000457745 PCID2Q5JVF3 399 aa8.78□□□□□ -1
RIF1-208ENST00000457745 SPANXN3Q5MJ09 141 aa8.78□□□□□ -1
RIF1-208ENST00000457745 SWT1Q5T5J6 900 aaKnown RBP8.78□□□□□ -1
RIF1-208ENST00000457745 TEDDM1Q5T9Z0 273 aa8.78□□□□□ -1
RIF1-208ENST00000457745 TTC19Q6DKK2 380 aaPredicted RBP8.78□□□□□ -1
RIF1-208ENST00000457745 RETSATQ6NUM9 610 aa8.78□□□□□ -1
RIF1-208ENST00000457745 PACS1Q6VY07 963 aa8.78□□□□□ -1
RIF1-208ENST00000457745 MARK2Q7KZI7 788 aaKnown RBP8.78□□□□□ -1
RIF1-208ENST00000457745 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
RIF1-208ENST00000457745 TRABD2AQ86V40 505 aa8.78□□□□□ -1
RIF1-208ENST00000457745 RASSF3Q86WH2 238 aa8.78□□□□□ -1
RIF1-208ENST00000457745 TDRPQ86YL5 185 aa8.78□□□□□ -1
RIF1-208ENST00000457745 AHI1Q8N157 1196 aa8.78□□□□□ -1
RIF1-208ENST00000457745 C4orf33Q8N1A6 199 aa8.78□□□□□ -1
RIF1-208ENST00000457745 TERB1Q8NA31 727 aa8.78□□□□□ -1
RIF1-208ENST00000457745 GRIN3AQ8TCU5 1115 aa8.78□□□□□ -1
RIF1-208ENST00000457745 PDCD6IPQ8WUM4 868 aaKnown RBP8.78□□□□□ -1
RIF1-208ENST00000457745 ARRDC3Q96B67 414 aa8.78□□□□□ -1
RIF1-208ENST00000457745 ECHDC3Q96DC8 303 aa8.78□□□□□ -1
RIF1-208ENST00000457745 PGM2Q96G03 612 aa8.78□□□□□ -1
RIF1-208ENST00000457745 RANBP9Q96S59 729 aa8.78□□□□□ -1
RIF1-208ENST00000457745 FERMT1Q9BQL6 677 aa8.78□□□□□ -1
RIF1-208ENST00000457745 SLC2A11Q9BYW1 496 aa8.78□□□□□ -1
RIF1-208ENST00000457745 TSPYL1Q9H0U9 437 aa8.78□□□□□ -1
RIF1-208ENST00000457745 ZDHHC6Q9H6R6 413 aa8.78□□□□□ -1
RIF1-208ENST00000457745 IARS2Q9NSE4 1012 aaKnown RBP8.78□□□□□ -1
RIF1-208ENST00000457745 ELOVL2Q9NXB9 296 aa8.78□□□□□ -1
RIF1-208ENST00000457745 HECAQ9UBI9 543 aaPredicted RBP8.78□□□□□ -1
RIF1-208ENST00000457745 PCDHB9Q9Y5E1 797 aa8.78□□□□□ -1
RIF1-208ENST00000457745 CCDC162PA2VCL2 907 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 TRIM49D1C9J1S8 452 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 GOLGA8RI6L899 631 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 K7EQS6 105 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 NDC80O14777 642 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 SIN3BO75182 1162 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 SPAG7O75391 227 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 ZNF189O75820 626 aaPredicted RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 VAPBO95292 243 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 IGSF6O95976 241 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 GSRP00390 522 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 FGF1P05230 155 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 DLDP09622 509 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 MYZAPP0CAP1 466 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 HNRNPLP14866 589 aaKnown RBP eCLIP8.77□□□□□ -1.01
RIF1-208ENST00000457745 GM2AP17900 193 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 POLR2EP19388 210 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 HLA-DPA1P20036 260 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 ADRA1DP25100 572 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 HPDP32754 393 aaPredicted RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 SLC1A2P43004 574 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 CSNK1DP48730 415 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 GALK1P51570 392 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 EIF3BP55884 814 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 GEMIN4P57678 1058 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 AP1S1P61966 158 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 ACVR1Q04771 509 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
RIF1-208ENST00000457745 MGAT5Q09328 741 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 CTBP1Q13363 440 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 SMAD4Q13485 552 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 DMC1Q14565 340 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 ZNF234Q14588 700 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 ACCSLQ4AC99 568 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 RBM20Q5T481 1227 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 C9orf64Q5T6V5 341 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 FSTL4Q6MZW2 842 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 CDHR3Q6ZTQ4 885 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 LINC00523Q86TU6 105 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 KCNMB4Q86W47 210 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 CCDC117Q8IWD4 279 aaPredicted RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 CTAGE3PQ8IX95 158 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 STK40Q8N2I9 435 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 RYBPQ8N488 228 aaPredicted RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 KIAA1958Q8N8K9 716 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
RIF1-208ENST00000457745 IFT43Q96FT9 208 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 ATXN7L3BQ96GX2 97 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 TBATAQ96M53 351 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 FAM129BQ96TA1 746 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 TRMT61BQ9BVS5 477 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 IL22Q9GZX6 179 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 CAB39LQ9H9S4 337 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 MRM3Q9HC36 420 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 BPIFA1Q9NP55 256 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 MLXIPLQ9NP71 852 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 MED4Q9NPJ6 270 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 CACNA2D2Q9NY47 1150 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 LIMD1Q9UGP4 676 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 FKBPLQ9UIM3 349 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 GRID1Q9ULK0 1009 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 ITM2BQ9Y287 266 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 MTO1Q9Y2Z2 717 aaKnown RBP8.77□□□□□ -1.01
RIF1-208ENST00000457745 ZNF711Q9Y462 761 aa8.77□□□□□ -1.01
RIF1-208ENST00000457745 PLXNA2O75051 1894 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms