RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF618Q5T7W0 954 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 SCARA5Q6ZMJ2 495 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 TTC30AQ86WT1 665 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PHYKPLQ8IUZ5 450 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CNTD1Q8N815 330 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 LEMD2Q8NC56 503 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 MAGEE2Q8TD90 523 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 HDAC10Q969S8 669 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PMEPA1Q969W9 287 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 VPS33AQ96AX1 596 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ASB9Q96DX5 294 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 SIGLEC11Q96RL6 698 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RTKNQ9BST9 563 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CDADC1Q9BWV3 514 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC6A13Q9NSD5 602 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC8A2Q9UPR5 921 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 KCNN4O15554 427 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 GAS2O43903 313 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 SERPINE1P05121 402 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 HSPA1LP34931 641 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 NUP107P57740 925 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PSME3P61289 254 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PSMC1P62191 440 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 TUBA4AP68366 448 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 LAPTM5Q13571 262 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CUL2Q13617 745 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 TP53BP2Q13625 1128 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 GRB7Q14451 532 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ADRM1Q16186 407 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 FSCN1Q16658 493 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CYP27C1Q4G0S4 372 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 BRDTQ58F21 947 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ATXN7L2Q5T6C5 722 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ATF7IP2Q5U623 682 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 MOXD1Q6UVY6 613 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 BNC2Q6ZN30 1099 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CMTM5Q96DZ9 223 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF486Q96H40 463 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 UBXN10Q96LJ8 280 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ACOX2Q99424 681 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 MTMR12Q9C0I1 747 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 UBP1Q9NZI7 540 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ADA2Q9NZK5 511 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PTGES3LE9PB15 166 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 POLRMTO00411 1230 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 GAS7O60861 476 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CYP2C8P10632 490 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 HOXD8P13378 290 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TPH1P17752 444 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MGAT1P26572 445 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 IL12AP29459 219 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ATN1P54259 1190 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 BCAT1P54687 386 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ARPP19P56211 112 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ISL1P61371 349 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 EMX1Q04741 257 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 C1QBPQ07021 282 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CERCAMQ5T4B2 595 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CROCCP3Q8IVE0 287 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 IL17RDQ8NFM7 739 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 OR7G1Q8NGA0 311 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TRPM4Q8TD43 1214 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 PPP1R13LQ8WUF5 828 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 FAR1Q8WVX9 515 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 RTP4Q96DX8 246 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 RNF157Q96PX1 679 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 AMNQ9BXJ7 453 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ST6GALNAC4Q9H4F1 302 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ACTL8Q9H568 366 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 NARFLQ9H6Q4 476 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 POLR3BQ9NW08 1133 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 DPP3Q9NY33 737 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 PADI4Q9UM07 663 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC30A1Q9Y6M5 507 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MYO7BQ6PIF6 2116 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM72CH0Y354 149 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CCL22O00626 93 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CTDSP2O14595 271 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SIX3O95343 332 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 AHSGP02765 367 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MBL2P11226 248 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CPB1P15086 417 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 NAGAP17050 411 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC7A1P30825 629 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 LEPRP48357 1165 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 HLCSP50747 726 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 HSPA2P54652 639 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SELPLGQ14242 412 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CCDC153Q494R4 210 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 RARS2Q5T160 578 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM72AQ5TYM5 149 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM72DQ6L9T8 149 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 Q6ZPB1 254 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MIER3Q7Z3K6 550 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM72BQ86X60 149 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF300Q96RE9 604 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 KCNA7Q96RP8 456 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TBCBQ99426 244 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 NEK6Q9HC98 313 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 XPNPEP3Q9NQH7 507 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms