RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 NEBLO76041 1014 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 RASGRP1O95267 797 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 CD48P09326 243 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 KRT10P13645 584 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 MX2P20592 715 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 GARSP41250 739 aaKnown RBP17.95■□□□□ 0.46
MSH6-207ENST00000456246 RPIAP49247 311 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 GALNT2Q10471 571 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 RALGDSQ12967 914 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 MMRN1Q13201 1228 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 ELOCQ15369 112 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 IFI16Q16666 785 aaKnown RBP17.95■□□□□ 0.46
MSH6-207ENST00000456246 PRRT3Q5FWE3 981 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 FAXCQ5TGI0 409 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 NCBP2-AS2Q69YL0 99 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 LIPIQ6XZB0 460 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 FSTL5Q8N475 847 aaPredicted RBP17.95■□□□□ 0.46
MSH6-207ENST00000456246 TEX26Q8N6G2 289 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 RNF214Q8ND24 703 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 MDM1Q8TC05 714 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 FAF2Q96CS3 445 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 PACSIN1Q9BY11 444 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 NRSN2Q9GZP1 204 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 PHTF1Q9UMS5 762 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 ZZEF1O43149 2961 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 ZNF487B1APH4 448 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 MFSD11O43934 449 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 RECQL5O94762 991 aaPredicted RBP17.94■□□□□ 0.46
MSH6-207ENST00000456246 CPP00450 1065 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 ANXA6P08133 673 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 ALPIP09923 528 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 CYP2A6P11509 494 aaPredicted RBP17.94■□□□□ 0.46
MSH6-207ENST00000456246 CES1P23141 567 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 KELP23276 732 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 GJC1P36383 396 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 ARHGAP25P42331 645 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 HK3P52790 923 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 INSM1Q01101 510 aaPredicted RBP17.94■□□□□ 0.46
MSH6-207ENST00000456246 TARDBPQ13148 414 aaKnown RBP eCLIP17.94■□□□□ 0.463e-8■■■■■ 32.2
MSH6-207ENST00000456246 INPP5AQ14642 412 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 ANKRD20A8PQ5CZ79 823 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 SARM1Q6SZW1 724 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 VSIG1Q86XK7 387 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 RBFAQ8N0V3 343 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 NDUFAF2Q8N183 169 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 PGBD5Q8N414 524 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 DCBLD1Q8N8Z6 715 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 PCDH19Q8TAB3 1148 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 MAML1Q92585 1016 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 TSGA13Q96PP4 275 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 APOOQ9BUR5 198 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 LRRC61Q9BV99 259 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 POLR1EQ9GZS1 481 aaKnown RBP17.94■□□□□ 0.46
MSH6-207ENST00000456246 NHEJ1Q9H9Q4 299 aaPredicted RBP17.94■□□□□ 0.46
MSH6-207ENST00000456246 NOD2Q9HC29 1040 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 INTUQ9ULD6 942 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 PCDHGC4Q9Y5F7 938 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 WDFY3Q8IZQ1 3526 aa17.94■□□□□ 0.46
MSH6-207ENST00000456246 SHROOM3Q8TF72 1996 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 AKR1B15C9JRZ8 316 aaPredicted RBP17.93■□□□□ 0.46
MSH6-207ENST00000456246 PSMD11O00231 422 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 CACNB4O00305 520 aaPredicted RBP17.93■□□□□ 0.46
MSH6-207ENST00000456246 PDE2AO00408 941 aaPredicted RBP17.93■□□□□ 0.46
MSH6-207ENST00000456246 MATN3O15232 486 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 MTA2O94776 668 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 PRKCGP05129 697 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 PCCBP05166 539 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 HOXC4P09017 264 aaPredicted RBP17.93■□□□□ 0.46
MSH6-207ENST00000456246 CA4P22748 312 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 CCNCP24863 283 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 VIPR1P32241 457 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 KIAA1024LP59773 190 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 CYP4F3Q08477 520 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 NR0B2Q15466 257 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 DEFB133Q30KQ1 61 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 C6orf132Q5T0Z8 1188 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 ARMC12Q5T9G4 340 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 LVRNQ6Q4G3 990 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 KDM7AQ6ZMT4 941 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 USP45Q70EL2 814 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 TPCN2Q8NHX9 752 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 SLC35G2Q8TBE7 412 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 PDCD6IPQ8WUM4 868 aaKnown RBP17.93■□□□□ 0.46
MSH6-207ENST00000456246 SCG3Q8WXD2 468 aaKnown RBP17.93■□□□□ 0.46
MSH6-207ENST00000456246 NAT6Q93015 286 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 WDR92Q96MX6 357 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 ZNF830Q96NB3 372 aaPredicted RBP17.93■□□□□ 0.46
MSH6-207ENST00000456246 BOCQ9BWV1 1114 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 B4GALT6Q9UBX8 382 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 KLQ9UEF7 1012 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 DOLKQ9UPQ8 538 aa17.93■□□□□ 0.46
MSH6-207ENST00000456246 LY6G6EA0A0G2JKS1 128 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 EME2A4GXA9 379 aaPredicted RBP17.92■□□□□ 0.46
MSH6-207ENST00000456246 TAF4O00268 1085 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 OPA1O60313 960 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 PGLSO95336 258 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 MT-CO3P00414 261 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 CTSEP14091 401 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 ADKP55263 362 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms