RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PHF21BQ96EK2 531 aa17.78■□□□□ 0.44
PTPN6-204ENST00000456013 TINF2Q9BSI4 451 aa17.78■□□□□ 0.44
PTPN6-204ENST00000456013 UPF3AQ9H1J1 476 aaKnown RBP17.78■□□□□ 0.44
PTPN6-204ENST00000456013 SLC38A7Q9NVC3 462 aa17.78■□□□□ 0.44
PTPN6-204ENST00000456013 TBC1D13Q9NVG8 400 aa17.78■□□□□ 0.44
PTPN6-204ENST00000456013 DUS2Q9NX74 493 aaKnown RBP17.78■□□□□ 0.44
PTPN6-204ENST00000456013 MTF2Q9Y483 593 aaPredicted RBP17.78■□□□□ 0.44
PTPN6-204ENST00000456013 TREHO43280 583 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 SLC7A2P52569 658 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 MFSD10Q14728 455 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 OR9I1Q8NGQ6 314 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 OR2T34Q8NGX1 318 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 OR2T3Q8NH03 318 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 LZICQ8WZA0 190 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 TMIGD2Q96BF3 282 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 PPWD1Q96BP3 646 aaKnown RBP17.77■□□□□ 0.44
PTPN6-204ENST00000456013 GMEB1Q9Y692 573 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 ZNF839A8K0R7 811 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 UBFD1O14562 309 aaKnown RBP17.77■□□□□ 0.44
PTPN6-204ENST00000456013 TIPRLO75663 272 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 YWHAQP27348 245 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 PRKCQQ04759 706 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 DCTN2Q13561 401 aaKnown RBP17.77■□□□□ 0.44
PTPN6-204ENST00000456013 EML3Q32P44 896 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 BRMS1LQ5PSV4 323 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 HECTD2Q5U5R9 776 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 MANEALQ5VSG8 457 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 ERMP1Q7Z2K6 904 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 KDELC2Q7Z4H8 507 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 SPNS2Q8IVW8 549 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 SNX31Q8N9S9 440 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 GRIN3AQ8TCU5 1115 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 ZUFSPQ96AP4 578 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 L3HYPDHQ96EM0 354 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 ARNT2Q9HBZ2 717 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 SLC8A2Q9UPR5 921 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 BPTFQ12830 3046 aa17.77■□□□□ 0.44
PTPN6-204ENST00000456013 BMP10O95393 424 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 CLCNKBP51801 687 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 GALNT7Q86SF2 657 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 FUNDC1Q8IVP5 155 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 FIBCD1Q8N539 461 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 PCYOX1LQ8NBM8 494 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 ANKRD49Q8WVL7 239 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 CANT1Q8WVQ1 401 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 MYLPFQ96A32 169 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 TCF12Q99081 682 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 CLK4Q9HAZ1 481 aaKnown RBP17.76■□□□□ 0.43
PTPN6-204ENST00000456013 BBIP1A8MTZ0 92 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 PLOD2O00469 737 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 IRAK2O43187 625 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 CKMT2P17540 419 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 NELFEP18615 380 aaKnown RBP17.76■□□□□ 0.43
PTPN6-204ENST00000456013 GPX3P22352 226 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 PCSK1P29120 753 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 NDST2P52849 883 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 EMP3P54852 163 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 WNT3AP56704 352 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 STX1BP61266 288 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 MAP7D1Q3KQU3 841 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 ZNF678Q5SXM1 525 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 ARTNQ5T4W7 220 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 CLEC6AQ6EIG7 209 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 KDELC1Q6UW63 502 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 BEND5Q7L4P6 421 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 LPCAT2Q7L5N7 544 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 TFAP2CQ92754 450 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 GFM2Q969S9 779 aaKnown RBP17.76■□□□□ 0.43
PTPN6-204ENST00000456013 TRIM62Q9BVG3 475 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 NDFIP2Q9NV92 336 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 VWA7Q9Y334 891 aa17.76■□□□□ 0.43
PTPN6-204ENST00000456013 MEIS3P2A8K0S8 358 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 SOCS2O14508 198 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 PAGE1O75459 146 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 WISP3O95389 354 aaPredicted RBP17.75■□□□□ 0.43
PTPN6-204ENST00000456013 ATP6V1B2P21281 511 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 GRIA3P42263 894 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 GRB14Q14449 540 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 MYBPC3Q14896 1274 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 AFMIDQ63HM1 303 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 GPR142Q7Z601 462 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 PACRGLQ8N7B6 248 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 C3orf58Q8NDZ4 430 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 GPATCH1Q9BRR8 931 aaKnown RBP17.75■□□□□ 0.43
PTPN6-204ENST00000456013 SLC39A3Q9BRY0 314 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 FBRSL1Q9HCM7 1045 aaKnown RBP17.75■□□□□ 0.43
PTPN6-204ENST00000456013 CCM2LQ9NUG4 571 aaPredicted RBP17.75■□□□□ 0.43
PTPN6-204ENST00000456013 CROCCQ5TZA2 2017 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 A0A0J9YVX5 310 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 AKAP10O43572 662 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 SUPT7LO94864 414 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 ALDOCP09972 364 aaKnown RBP17.75■□□□□ 0.43
PTPN6-204ENST00000456013 SLC26A3P40879 764 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 PCSK7Q16549 785 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 NOMO2Q5JPE7 1267 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 RETREG3Q86VR2 466 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 MFSD2AQ8NA29 543 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 DIS3LQ8TF46 1054 aaKnown RBP17.75■□□□□ 0.43
PTPN6-204ENST00000456013 C19orf60Q96EN9 201 aa17.75■□□□□ 0.43
PTPN6-204ENST00000456013 BIRC8Q96P09 236 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms