RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 ILKQ13418 452 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 MTM1Q13496 603 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 SPA17Q15506 151 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 ZFYVE27Q5T4F4 411 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 CBARPQ8N350 705 aaPredicted RBP20.49■□□□□ 0.87
TNRC18-208ENST00000455076 CALR3Q96L12 384 aaKnown RBP20.49■□□□□ 0.87
TNRC18-208ENST00000455076 ZNF830Q96NB3 372 aaPredicted RBP20.49■□□□□ 0.87
TNRC18-208ENST00000455076 NT5MQ9NPB1 228 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 UCKL1Q9NWZ5 548 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 DNAJC28Q9NX36 388 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 NLGN3Q9NZ94 848 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 B4GALT6Q9UBX8 382 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 COQ6Q9Y2Z9 468 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 EPN1Q9Y6I3 576 aaPredicted RBP20.49■□□□□ 0.87
TNRC18-208ENST00000455076 LRP4O75096 1905 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 PLXNB3Q9ULL4 1909 aa20.49■□□□□ 0.87
TNRC18-208ENST00000455076 GOLGA4Q13439 2230 aaKnown RBP20.49■□□□□ 0.87
TNRC18-208ENST00000455076 PSMD11O00231 422 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 APOL1O14791 398 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 SCAMP1O15126 338 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 SPOPO43791 374 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 MAP3K6O95382 1288 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 KRT1P04264 644 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 ELFN1P0C7U0 828 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 CCNB1P14635 433 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 ACP1P24666 158 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 CDC25BP30305 580 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 THOP1P52888 689 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 IFI35P80217 286 aaPredicted RBP20.48■□□□□ 0.87
TNRC18-208ENST00000455076 SMAD1Q15797 465 aaKnown RBP20.48■□□□□ 0.87
TNRC18-208ENST00000455076 UNQ6494/PRO21346Q6UXR6 183 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 KDM7AQ6ZMT4 941 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 CCDC13Q8IYE1 715 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 FAM181AQ8N9Y4 354 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 ZNF548Q8NEK5 533 aaPredicted RBP20.48■□□□□ 0.87
TNRC18-208ENST00000455076 BTN2A2Q8WVV5 523 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 SCRN2Q96FV2 425 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 IL12RB2Q99665 862 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 SEMA3CQ99985 751 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 KCTD5Q9NXV2 234 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 KLF15Q9UIH9 416 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 ALG6Q9Y672 507 aa20.48■□□□□ 0.87
TNRC18-208ENST00000455076 TMEM8BA6NDV4 472 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 NEMP2A6NFY4 417 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 SOWAHDA6NJG2 315 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 BTNL10A8MVZ5 291 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 TRIM38O00635 465 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 LZTS3O60299 673 aaPredicted RBP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 RFPL3O75679 317 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 RECQL5O94762 991 aaPredicted RBP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 PROS1P07225 676 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 HOXC4P09017 264 aaPredicted RBP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 CKMT2P17540 419 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 VIPR1P32241 457 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 ARMC12Q5T9G4 340 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 ESRP1Q6NXG1 681 aaKnown RBP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 CCNI2Q6ZMN8 369 aaPredicted RBP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 GALNT15Q8N3T1 639 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 ARRDC2Q8TBH0 407 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 PIH1D2Q8WWB5 315 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 COQ10AQ96MF6 247 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 DUSP23Q9BVJ7 150 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 BRD8Q9H0E9 1235 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 RBM22Q9NW64 420 aaKnown RBP eCLIP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 PNMA8BQ9ULN7 279 aaPredicted RBP20.47■□□□□ 0.87
TNRC18-208ENST00000455076 RAI2Q9Y5P3 530 aa20.47■□□□□ 0.87
TNRC18-208ENST00000455076 SIGLEC6O43699 453 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 HEXIM1O94992 359 aaKnown RBP20.46■□□□□ 0.87
TNRC18-208ENST00000455076 HLA-DQB2P05538 268 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 ALPPL2P10696 532 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 CYP2A6P11509 494 aaPredicted RBP20.46■□□□□ 0.87
TNRC18-208ENST00000455076 CDKN2BP42772 138 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 NOP2P46087 812 aaKnown RBP20.46■□□□□ 0.87
TNRC18-208ENST00000455076 IHHQ14623 411 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 NFATC4Q14934 902 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 PDK1Q15118 436 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 CNGA3Q16281 694 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 MFSD7Q6UXD7 560 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 KATNAL2Q8IYT4 538 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 KDF1Q8NAX2 398 aaPredicted RBP20.46■□□□□ 0.87
TNRC18-208ENST00000455076 TPCN2Q8NHX9 752 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 TDRD1Q9BXT4 1180 aaKnown RBP20.46■□□□□ 0.87
TNRC18-208ENST00000455076 USP29Q9HBJ7 922 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 IMPACTQ9P2X3 320 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 REXO2Q9Y3B8 237 aaKnown RBP20.46■□□□□ 0.87
TNRC18-208ENST00000455076 HYOU1Q9Y4L1 999 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 KNTC1P50748 2209 aa20.46■□□□□ 0.87
TNRC18-208ENST00000455076 DMXL2Q8TDJ6 3036 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 C1QTNF9BB2RNN3 333 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 TPP1O14773 563 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 PPP1R12AO14974 1030 aaPredicted RBP20.45■□□□□ 0.86
TNRC18-208ENST00000455076 C1QTNF9P0C862 333 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 JUNDP17535 347 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 LHCGRP22888 699 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 TRIM23P36406 574 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 NR2C2P49116 596 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 KIAA1024LP59773 190 aa20.45■□□□□ 0.86
TNRC18-208ENST00000455076 RPL26P61254 145 aaKnown RBP20.45■□□□□ 0.86
TNRC18-208ENST00000455076 SEMG2Q02383 582 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms