RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ARCQ7LC44 396 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 NET1Q7Z628 596 aaPredicted RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 KBTBD2Q8IY47 623 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 CRYBG2Q8N1P7 616 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 SMG8Q8ND04 991 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 LZICQ8WZA0 190 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 CINPQ9BW66 212 aaPredicted RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 EML4Q9HC35 981 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.23□□□□□ -0.613e-12■■■■□ 22.7
DDR1-240ENST00000454612 PKP3Q9Y446 797 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 HMX2A2RU54 273 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 RGSL1A5PLK6 1076 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 NCK1P16333 377 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 UGT1A6P19224 532 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 NR4A1P22736 598 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 ACVRL1P37023 503 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 PSME3P61289 254 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 POU4F1Q01851 419 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 NFYCQ13952 458 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 PTPRRQ15256 657 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 TCEA2Q15560 299 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 PTPRNQ16849 979 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 KIAA0319Q5VV43 1072 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 LIPMQ5VYY2 423 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 PKN3Q6P5Z2 889 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 LRRTM3Q86VH5 581 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 RALGPS2Q86X27 583 aaPredicted RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 RELL1Q8IUW5 271 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CEP97Q8IW35 865 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 DDHD1Q8NEL9 900 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CLHC1Q8NHS4 586 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 PPP2R3CQ969Q6 453 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CDK15Q96Q40 435 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 NPY6RQ99463 290 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 MLPHQ9BV36 600 aaPredicted RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 ATP13A1Q9HD20 1204 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 HCSTQ9UBK5 93 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 SLC30A1Q9Y6M5 507 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 UBXN8O00124 270 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 FKBP6O75344 327 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CLIC3O95833 236 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 ITGAXP20702 1163 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 RENBPP51606 427 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 RPS24P62847 133 aaKnown RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 ENPEPQ07075 957 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 DEFB115Q30KQ5 88 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 LIN52Q52LA3 116 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 ARMC12Q5T9G4 340 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CES4AQ5XG92 561 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 SATL1Q86VE3 508 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CLEC4FQ8N1N0 589 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CNTD1Q8N815 330 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 PTCD3Q96EY7 689 aaKnown RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 MTG1Q9BT17 334 aaPredicted RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 ADAMTS10Q9H324 1103 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 RHOJQ9H4E5 214 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 ZFP14Q9HCL3 533 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 TMEM30AQ9NV96 361 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 LNPEPQ9UIQ6 1025 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 TRHDEQ9UKU6 1024 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 ATP11BQ9Y2G3 1177 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 E9PAM4 449 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 H3BMM5 538 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 WFS1O76024 890 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 HGFP14210 728 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 HMOX2P30519 316 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 KCNA10Q16322 511 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 CNPY1Q3B7I2 92 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 TBCELQ5QJ74 424 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 OR52E8Q6IFG1 317 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 RBM12BQ8IXT5 1001 aaKnown RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 VPS33AQ96AX1 596 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 SIRPGQ9P1W8 387 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 CDH9Q9ULB4 789 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 RAP2CQ9Y3L5 183 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 MTF2Q9Y483 593 aaPredicted RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 PAPPA2Q9BXP8 1791 aa11.22□□□□□ -0.61
DDR1-240ENST00000454612 COL11A1P12107 1806 aaPredicted RBP11.22□□□□□ -0.61
DDR1-240ENST00000454612 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 IQCF5A8MTL0 148 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 F5H5T6 163 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 BIRC5O15392 142 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 GPR32O75388 356 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 VCLP18206 1134 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 MAGEA10P43363 369 aaPredicted RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 KCNQ1P51787 676 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 ALFQ53S48 1182 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 TAF2Q6P1X5 1199 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 ZNF534Q76KX8 674 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 CUZD1Q86UP6 607 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 FBXW8Q8N3Y1 598 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 ZFAND2BQ8WV99 257 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 LIN28AQ9H9Z2 209 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms