RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 PSAT1Q9Y617 370 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 SLCO1B1Q9Y6L6 691 aa4.99□□□□□ -1.61
RIF1-207ENST00000454583 PDE4DIPQ5VU43 2346 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 A0A0J9YYE9 177 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 GMNCA6NCL1 334 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 SPECC1L-ADORA2AF8WAN1 911 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 SPOPO43791 374 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TRBC1P01850 177 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 IGHV4-34P06331 123 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 MBL2P11226 248 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 PABPC1P11940 636 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 CES1P23141 567 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 EPHB2P29323 1055 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TRIM23P36406 574 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 GCGRP47871 477 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 CCNG1P51959 295 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 RPS14P62263 151 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 LMNB2Q03252 620 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TFF2Q03403 129 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 DLG1Q12959 904 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 BNIP1Q12981 228 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ZNF234Q14588 700 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 PDK4Q16654 411 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 RNF219Q5W0B1 726 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 EGFLAMQ63HQ2 1017 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TIGD7Q6NT04 549 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 CYHR1Q6ZMK1 362 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ADAT2Q7Z6V5 191 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 UNC5BQ8IZJ1 945 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TDRD5Q8NAT2 981 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 TMEM145Q8NBT3 493 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 FLVCR1-AS1Q8TAF5 88 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 WFIKKN2Q8TEU8 576 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 P3H4Q92791 437 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 SKA1Q96BD8 255 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 PTCD3Q96EY7 689 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 MAGEB18Q96M61 343 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ZNF641Q96N77 438 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 SYBUQ9NX95 663 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 KIAA1522Q9P206 1035 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 WNT16Q9UBV4 365 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ATG2BQ96BY7 2078 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 GOLGA6L10A0A0M3HER8 536 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TCRBV9S1A1TA0A576 114 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 NPIPB15A6NHN6 443 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 TMEM110-MUSTN1A8MSY1 372 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 F5H5T6 163 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 PPP1R12AO14974 1030 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 MGRN1O60291 552 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ALDOAP04075 364 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 MYZAPP0CAP1 466 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ITGB7P26010 798 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 GRIA4P48058 902 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 STC1P52823 247 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 BTKQ06187 659 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ACTN3Q08043 901 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 POLD3Q15054 466 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 DBN1Q16643 649 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 KYNUQ16719 465 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 LONRF1Q17RB8 773 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 AAK1Q2M2I8 961 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ARL13BQ3SXY8 428 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 KHDC1Q4VXA5 237 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 TRMT10BQ6PF06 316 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 CENPUQ71F23 418 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 MTSS1LQ765P7 747 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 MAVSQ7Z434 540 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 PCGF5Q86SE9 256 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 PCDH20Q8N6Y1 951 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 MAGEC3Q8TD91 643 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 SCRN2Q96FV2 425 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 LRIG1Q96JA1 1093 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TTC25Q96NG3 672 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 KXD1Q9BQD3 176 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 C1QTNF3Q9BXJ4 246 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 DUS2Q9NX74 493 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.98□□□□□ -1.61
RIF1-207ENST00000454583 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 A0A1W2PPM1 405 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 FADS2P1A8MWK0 482 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 CHUKO15111 745 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 UGT1A9O60656 530 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 MAP3K6O95382 1288 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 MYL4P12829 197 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 RPS3P23396 243 aaKnown RBP eCLIP4.98□□□□□ -1.61
RIF1-207ENST00000454583 HMGCLP35914 325 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 CLCN7P51798 805 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ARPP19P56211 112 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 SLC8A3P57103 927 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 GNGT1P63211 74 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 BNC1Q01954 994 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 VEPH1Q14D04 833 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ZNF789Q5FWF6 425 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 KIAA0930Q6ICG6 404 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 CRTC1Q6UUV9 634 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 DBX2Q6ZNG2 339 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 ZNF765Q7L2R6 523 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 PARS2Q7L3T8 475 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 SPNS2Q8IVW8 549 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 CCDC33Q8N5R6 958 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms