RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 NOD2Q9HC29 1040 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 PCDH12Q9NPG4 1184 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 COL5A1P20908 1838 aaPredicted RBP14.76□□□□□ -0.05
VPS16-205ENST00000453689 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.75□□□□□ -0.05
VPS16-205ENST00000453689 ESPNB1AK53 854 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 H0Y8X5 98 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 TLR4O00206 839 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 TRAFD1O14545 582 aaPredicted RBP14.75□□□□□ -0.05
VPS16-205ENST00000453689 RAD51BO15315 384 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 MTSS1O43312 755 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 PRKCGP05129 697 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 ZNF883P0CG24 379 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 CCNB1P14635 433 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 NXPH1P58417 271 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 ELP6Q0PNE2 266 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 SLC14A1Q13336 389 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 ZNF423Q2M1K9 1284 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 TMEM52BQ4KMG9 183 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 PPM1JQ5JR12 505 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 GCNT7Q6ZNI0 430 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 ERMP1Q7Z2K6 904 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 CREG2Q8IUH2 290 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 SLC35B2Q8TB61 432 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 ATG4AQ8WYN0 398 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 CAPZA3Q96KX2 299 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 FERMT1Q9BQL6 677 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 WRAP53Q9BUR4 548 aaKnown RBP14.75□□□□□ -0.05
VPS16-205ENST00000453689 C1QTNF2Q9BXJ5 285 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 TM7SF3Q9NS93 570 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 SMARCAL1Q9NZC9 954 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 RNF14Q9UBS8 474 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 ATP8A1Q9Y2Q0 1164 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 PCDHGC4Q9Y5F7 938 aa14.75□□□□□ -0.05
VPS16-205ENST00000453689 KCNK1O00180 336 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 RIOK3O14730 519 aaKnown RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 HTRA2O43464 458 aaPredicted RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 LIASO43766 372 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 MMP20O60882 483 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 SOCS5O75159 536 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 NEBLO76041 1014 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 KCNA4P22459 653 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 MMP12P39900 470 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 PAFAH1B1P43034 410 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 CLDN2P57739 230 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 IFI35P80217 286 aaPredicted RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 OVGP1Q12889 678 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 TRAF2Q12933 501 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 SGCGQ13326 291 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 CCNG2Q16589 344 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 RALGPS1Q5JS13 557 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 ALG1LQ6GMV1 187 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 PSAPL1Q6NUJ1 521 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 DARS2Q6PI48 645 aaKnown RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 B4GALNT4Q76KP1 1039 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 PIP4P1Q86T03 277 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 SPATS2Q86XZ4 545 aaKnown RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 PAF1Q8N7H5 531 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 DEFB124Q8NES8 71 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 CXorf40AQ8TE69 158 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 C1orf54Q8WWF1 131 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 ASB12Q8WXK4 309 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 ZNF592Q92610 1267 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 KLHDC7BQ96G42 594 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 LENG8Q96PV6 779 aaPredicted RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 KLF6Q99612 283 aaPredicted RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 SEMA3CQ99985 751 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 POLR1EQ9GZS1 481 aaKnown RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 GDF3Q9NR23 364 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 HOMER3Q9NSC5 361 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 HAUS2Q9NVX0 235 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 RBM22Q9NW64 420 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS16-205ENST00000453689 AMACRQ9UHK6 382 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 DNPEPQ9ULA0 475 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 SCN8AQ9UQD0 1980 aa14.74□□□□□ -0.05
VPS16-205ENST00000453689 CNOT1A5YKK6 2376 aaKnown RBP14.74□□□□□ -0.05
VPS16-205ENST00000453689 ARID1BQ8NFD5 2236 aaPredicted RBP14.73□□□□□ -0.05
VPS16-205ENST00000453689 PTPRBP23467 1997 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 GOLGA6L10A0A0M3HER8 536 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 POM121BA6NF01 834 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 GIPC1O14908 333 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 ZNF500O60304 480 aaPredicted RBP14.73□□□□□ -0.05
VPS16-205ENST00000453689 DFNA5O60443 496 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 MAGEC1O60732 1142 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 TM7SF2O76062 418 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 KCNK5O95279 499 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 HLA-DQB2P05538 268 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 THEGLP0DJG4 465 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 CSRP1P21291 193 aaKnown RBP14.73□□□□□ -0.05
VPS16-205ENST00000453689 RBL1P28749 1068 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 NOVA1P51513 510 aaKnown RBP14.73□□□□□ -0.05
VPS16-205ENST00000453689 SEMG2Q02383 582 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 DSC2Q02487 901 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 ITKQ08881 620 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 ZBTB17Q13105 803 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 OASLQ15646 514 aaKnown RBP14.73□□□□□ -0.05
VPS16-205ENST00000453689 PRAMEF14Q5SWL7 426 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 ERAP2Q6P179 960 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 DRICH1Q6PGQ1 229 aaPredicted RBP14.73□□□□□ -0.05
VPS16-205ENST00000453689 ABI3BPQ7Z7G0 1075 aa14.73□□□□□ -0.05
VPS16-205ENST00000453689 PRELID2Q8N945 189 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms