RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 RBM48Q5RL73 367 aaKnown RBP16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 LCN8Q6JVE9 175 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 SCYL2Q6P3W7 929 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 OR13J1Q8NGT2 312 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 SNX18Q96RF0 628 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 COQ7Q99807 217 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 DHRS9Q9BPW9 319 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 TMEM246Q9BRR3 403 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 DNAI2Q9GZS0 605 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 PLEKHA5Q9HAU0 1116 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 LTB4R2Q9NPC1 389 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 PCM1Q15154 2024 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 ISPDA4D126 451 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 ASS1P00966 412 aaKnown RBP16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 MLNP12872 115 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 SERPINB10P48595 397 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 MYL6P60660 151 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 CCNA1P78396 465 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 SPATC1Q76KD6 591 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 THAP5Q7Z6K1 395 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 LSMEM1Q8N8F7 131 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 DSN1Q9H410 356 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 INTS10Q9NVR2 710 aaKnown RBP16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 GTSE1Q9NYZ3 720 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 MORF4L1Q9UBU8 362 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 MID2Q9UJV3 735 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
CTNNB1-210ENST00000453024 SYCE1LA8MT33 242 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ERVH48-1M5A8F1 160 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ARPC2O15144 300 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 INPP4BO15327 924 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 DLX3O60479 287 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 TMCC2O75069 709 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 DAB1O75553 588 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 SAT1P21673 171 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 TNFAIP2Q03169 654 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ZNF280DQ6N043 979 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 HACD2Q6Y1H2 254 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 SLC22A15Q8IZD6 547 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 OR6F1Q8NGZ6 308 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 DYNC2LI1Q8TCX1 351 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 PHF10Q8WUB8 498 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 TRIM8Q9BZR9 551 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 TRIM39Q9HCM9 518 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 SOX11P35716 441 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ZNF143P52747 638 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ORC1Q13415 861 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ARHGEF6Q15052 776 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 NPTX1Q15818 432 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 MEP1AQ16819 746 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 TRIM71Q2Q1W2 868 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 HSDL1Q3SXM5 330 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 PYCR3Q53H96 274 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 FAM102AQ5T9C2 384 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 CDC42EP5Q6NZY7 148 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 CNSTQ6PJW8 725 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 GATAD2AQ86YP4 633 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 CELF2-AS1Q8N7Q2 184 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 FAM83FQ8NEG4 500 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 CHAC2Q8WUX2 184 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ADPGKQ9BRR6 497 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 AGO4Q9HCK5 861 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 HPS4Q9NQG7 708 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 GIMAP4Q9NUV9 329 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ZFC3H1O60293 1989 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 SLX4Q8IY92 1834 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 C16orf96A6NNT2 1141 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 KRT6AP02538 564 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 KRT6BP04259 564 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 POLBP06746 335 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 HNRNPLP14866 589 aaKnown RBP eCLIP16.69■□□□□ 0.268e-9■□□□□ 8.4
CTNNB1-210ENST00000453024 C1QTNF8P60827 252 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 OLIG2Q13516 323 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 GRAPQ13588 217 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 GRAPLQ8TC17 118 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 SLC10A4Q96EP9 437 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 C1QTNF1Q9BXJ1 281 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 B3GNT4Q9C0J1 378 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 PLSCR3Q9NRY6 295 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ACTR3BQ9P1U1 418 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ZNF639Q9UID6 485 aa16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 MTF2Q9Y483 593 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-210ENST00000453024 ARHGAP33O14559 1287 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 FCGR1AP12314 374 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 PCMT1P22061 227 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 POLD2P49005 469 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 TCP10Q12799 353 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 CAPRIN1Q14444 709 aaKnown RBP16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 NFE2Q16621 373 aaPredicted RBP16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 NEK10Q6ZWH5 1172 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 SMG8Q8ND04 991 aaKnown RBP16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 RDH11Q8TC12 318 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 RXFP2Q8WXD0 754 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 DEPDC7Q96QD5 511 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 OMDQ99983 421 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 NUDT5Q9UKK9 219 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 SLC39A10Q9ULF5 831 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 PDE10AQ9Y233 779 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 SPEF1Q9Y4P9 236 aa16.68■□□□□ 0.26
CTNNB1-210ENST00000453024 PCDHB3Q9Y5E6 796 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms