RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 SLC28A2O43868 658 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 GM2AP17900 193 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 ITIH1P19827 911 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 XPAP23025 273 aaPredicted RBP8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 HTR1BP28222 390 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 ETV5P41161 510 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 NSFP46459 744 aaKnown RBP8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 ZNF143P52747 638 aaPredicted RBP8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 RPL7AP62424 266 aaKnown RBP8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 MTM1Q13496 603 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 KRT31Q15323 416 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 PPP1R15BQ5SWA1 713 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 CERCAMQ5T4B2 595 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 SCYL2Q6P3W7 929 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 GKN2Q86XP6 184 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 JAMLQ86YT9 394 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 CCNJLQ8IV13 435 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 PELI3Q8N2H9 469 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 HCAR2Q8TDS4 363 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 OR1E3Q8WZA6 343 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 MCEEQ96PE7 176 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 STRADBQ9C0K7 418 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 LRRN3Q9H3W5 708 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 FGF22Q9HCT0 170 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 MRPL40Q9NQ50 206 aaKnown RBP8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 UBA2Q9UBT2 640 aaPredicted RBP8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 METRNQ9UJH8 293 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 ATP8A1Q9Y2Q0 1164 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 DGKBQ9Y6T7 804 aa8.89□□□□□ -0.99
DEPDC1B-202ENST00000453022 PRAMEF33A0A0G2JMD5 474 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 AGRPO00253 132 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 FGF10O15520 208 aaPredicted RBP8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 PRAMEF10O60809 474 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 PRAMEF11O60813 436 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 CALB1P05937 261 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 KIAA1024LP59773 190 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 OGDHQ02218 1023 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 ZFP36L1Q07352 338 aaKnown RBP8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 GRM3Q14832 879 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 BRAT1Q6PJG6 821 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 OGFOD3Q6PK18 319 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 SPRED1Q7Z699 444 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 Q8N9G6 341 aaPredicted RBP8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 TSEN2Q8NCE0 465 aaKnown RBP8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 CCL4L1Q8NHW4 92 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 ECHDC3Q96DC8 303 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 CELF6Q96J87 481 aaKnown RBP8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 NSMCE3Q96MG7 304 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 ZNF641Q96N77 438 aaPredicted RBP8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 TMEM74Q96NL1 305 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 NUP62CLQ9H1M0 184 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 CLMPQ9H6B4 373 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 CATSPERBQ9H7T0 1116 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 GPATCH2LQ9NWQ4 482 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 PISDQ9UG56 409 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 APPL1Q9UKG1 709 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 LOXL2Q9Y4K0 774 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 RNF215Q9Y6U7 377 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 PTPN13Q12923 2485 aa8.88□□□□□ -0.99
DEPDC1B-202ENST00000453022 B4DGG1 531 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 TMX2-CTNND1H3BSU7 103 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 NVLO15381 856 aaKnown RBP8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 RECQL5O94762 991 aaPredicted RBP8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 TNFP01375 233 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 JMJD7P0C870 316 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 LIPCP11150 499 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 GLB1P16278 677 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 WT1P19544 449 aaPredicted RBP8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 STAT1P42224 750 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 PAPOLAP51003 745 aaKnown RBP8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 AIF1P55008 147 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 TPI1P60174 286 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 NFATC3Q12968 1075 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 HLTFQ14527 1009 aaKnown RBP eCLIP8.87□□□□□ -0.995e-6■□□□□ 10.9
DEPDC1B-202ENST00000453022 SYCP1Q15431 976 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 CA9Q16790 459 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 ERAP2Q6P179 960 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 DNAJC24Q6P3W2 148 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 LIPIQ6XZB0 460 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 PRICKLE2Q7Z3G6 844 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 SRLQ86TD4 932 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 VASH2Q86V25 355 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 SLITRK4Q8IW52 837 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 ARHGAP12Q8IWW6 846 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 FAM46DQ8NEK8 389 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 OR6C4Q8NGE1 309 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 OR56A4Q8NGH8 313 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 ATL2Q8NHH9 583 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 ENOX1Q8TC92 643 aaKnown RBP8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 EXTL1Q92935 676 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 SGF29Q96ES7 293 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 TUBGCP5Q96RT8 1024 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 CNPY3Q9BT09 278 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 LGR4Q9BXB1 951 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 SLC39A8Q9C0K1 460 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 TMEM168Q9H0V1 697 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 WDR70Q9NW82 654 aa8.87□□□□□ -0.99
DEPDC1B-202ENST00000453022 FOXJ2Q9P0K8 574 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms