RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 SIRPGQ9P1W8 387 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 GULP1Q9UBP9 304 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 GPR34Q9UPC5 381 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 COQ6Q9Y2Z9 468 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 ARHGEF17Q96PE2 2063 aaPredicted RBP10.97□□□□□ -0.65
USP1-204ENST00000452143 NAV2Q8IVL1 2488 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 B8ZZF3 427 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 INSIG1O15503 277 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 PRAMEF11O60813 436 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 ZIC2O95409 532 aaPredicted RBP10.96□□□□□ -0.65
USP1-204ENST00000452143 RPLP0P05388 317 aaKnown RBP10.96□□□□□ -0.65
USP1-204ENST00000452143 ITIH2P19823 946 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 CSNK1DP48730 415 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 KIAA1024LP59773 190 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 SRP54P61011 504 aaKnown RBP10.96□□□□□ -0.65
USP1-204ENST00000452143 LY6DQ14210 128 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 INPP5AQ14642 412 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 CYTH1Q15438 398 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 PPP1R15BQ5SWA1 713 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 CERCAMQ5T4B2 595 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 PPP1R2P3Q6NXS1 205 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 ENPP7Q6UWV6 458 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 B3GNT8Q7Z7M8 397 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 ANKRD20A12PQ8NF67 263 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 GPR156Q8NFN8 814 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 TSACCQ96A04 125 aaPredicted RBP10.96□□□□□ -0.65
USP1-204ENST00000452143 ECHDC3Q96DC8 303 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 PDXPQ96GD0 296 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 SEMA4CQ9C0C4 833 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 SEPT11Q9NVA2 429 aaKnown RBP10.96□□□□□ -0.65
USP1-204ENST00000452143 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 APPL1Q9UKG1 709 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 OR1A2Q9Y585 309 aa10.96□□□□□ -0.65
USP1-204ENST00000452143 A0A1W2PQM1 296 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 ARHGAP42A6NI28 874 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 LGALS16A8MUM7 142 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 CACNB4O00305 520 aaPredicted RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 CASC3O15234 703 aaKnown RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 TNFP01375 233 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 PCCBP05166 539 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 HOXC4P09017 264 aaPredicted RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 ELFN1P0C7U0 828 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 CCDC172P0C7W6 258 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 JMJD7P0C870 316 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 GLB1P16278 677 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 UGT1A5P35504 534 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 COPB1P53618 953 aaKnown RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 RPL7AP62424 266 aaKnown RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 POLR2LP62875 67 aaKnown RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 RFTN1Q14699 578 aaPredicted RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 ZSCAN23Q3MJ62 389 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 DCUN1D2Q6PH85 259 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 RD3Q7Z3Z2 195 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 CAMK1DQ8IU85 385 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 CCNJLQ8IV13 435 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 FBXO39Q8N4B4 442 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 NETO2Q8NC67 525 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 OR56A4Q8NGH8 313 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
USP1-204ENST00000452143 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP1-204ENST00000452143 LRRN3Q9H3W5 708 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 AP4E1Q9UPM8 1137 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 FLNCQ14315 2725 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 BSNQ9UPA5 3926 aa10.95□□□□□ -0.66
USP1-204ENST00000452143 J3KR12 359 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 TNFRSF10CO14798 259 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 NVLO15381 856 aaKnown RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 NUDT21O43809 227 aaKnown RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 RECQL5O94762 991 aaPredicted RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 LIPCP11150 499 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 SLC5A2P31639 672 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 TRIM23P36406 574 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 AP1S1P61966 158 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 CCL7P80098 99 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 NSUN2Q08J23 767 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP1-204ENST00000452143 RALGDSQ12967 914 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 KIAA1614Q5VZ46 1190 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 OGFOD3Q6PK18 319 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 XKR5Q6UX68 686 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 DPPA4Q7L190 304 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 SPRED1Q7Z699 444 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 SRLQ86TD4 932 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 ZSWIM9Q86XI8 627 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 TSEN2Q8NCE0 465 aaKnown RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 FUBP1Q96AE4 644 aaKnown RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 ERGIC2Q96RQ1 377 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 AGPAT1Q99943 283 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 CINPQ9BW66 212 aaPredicted RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 FOXP3Q9BZS1 431 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 WDR26Q9H7D7 661 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 SP110Q9HB58 689 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 FGF22Q9HCT0 170 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 FANCLQ9NW38 375 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 LIMA1Q9UHB6 759 aaKnown RBP10.94□□□□□ -0.66
USP1-204ENST00000452143 LOXL2Q9Y4K0 774 aa10.94□□□□□ -0.66
USP1-204ENST00000452143 TMEM202A6NGA9 273 aa10.93□□□□□ -0.66
USP1-204ENST00000452143 PDE2AO00408 941 aaPredicted RBP10.93□□□□□ -0.66
USP1-204ENST00000452143 EEF2KO00418 725 aaKnown RBP10.93□□□□□ -0.66
USP1-204ENST00000452143 NOBOXO60393 691 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms