RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 NSMCE1Q8WV22 266 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 SCRN2Q96FV2 425 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 CDC6Q99741 560 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 BRD8Q9H0E9 1235 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 SAE1Q9UBE0 346 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 B4GALT6Q9UBX8 382 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 PHTF1Q9UMS5 762 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 COQ6Q9Y2Z9 468 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 PCDHB9Q9Y5E1 797 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 RAI2Q9Y5P3 530 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 KCNK1O00180 336 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 CSF2P04141 144 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 ATXN1LP0C7T5 689 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 TNNT1P13805 278 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 PECAM1P16284 738 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 LHCGRP22888 699 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 DGKAP23743 735 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 CTNNA2P26232 953 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 TRIM23P36406 574 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 NR2C2P49116 596 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 ARRB1P49407 418 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 YPEL5P62699 121 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 PDK1Q15118 436 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 IRF4Q15306 451 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 PPP2R5EQ16537 467 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 CDKN3Q16667 212 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 TFDP3Q5H9I0 405 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 DAAM2Q86T65 1068 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 NT5DC3Q86UY8 548 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 RFX6Q8HWS3 928 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 PELI3Q8N2H9 469 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 ALG3Q92685 438 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 SMIM14Q96QK8 99 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 MAK16Q9BXY0 300 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 POLR1EQ9GZS1 481 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 UCKL1Q9NWZ5 548 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 TRIM10Q9UDY6 481 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 EFR3BQ9Y2G0 817 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 HEY1Q9Y5J3 304 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 FRYQ5TBA9 3013 aa16.18■□□□□ 0.18
SCAMP4-205ENST00000452128 TRIM38O00635 465 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 TNFSF14O43557 240 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 CST8O60676 142 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 PIAS2O75928 621 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 RECQL5O94762 991 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 HEXIM1O94992 359 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 FTH1P19P0C7X4 201 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 NME1P15531 152 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 XPAP23025 273 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 PTPN7P35236 360 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 SKOR1P84550 965 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 TFDP2Q14188 446 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 LRRC14Q15048 493 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 CNGA3Q16281 694 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 ZFYVE27Q5T4F4 411 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 BBS12Q6ZW61 710 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 TECPR1Q7Z6L1 1165 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 PLA2G15Q8NCC3 412 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 CCNYQ8ND76 341 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 ADAMTS14Q8WXS8 1223 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 DESI2Q9BSY9 194 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 TMEM121BQ9BXQ6 578 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 TDRD1Q9BXT4 1180 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 ADGRG1Q9Y653 693 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 KNTC1P50748 2209 aa16.17■□□□□ 0.18
SCAMP4-205ENST00000452128 AKAP13Q12802 2813 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 NPIPB15A6NHN6 443 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 ITGAVP06756 1048 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 HOXC4P09017 264 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 TGM2P21980 687 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 VIPR1P32241 457 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 COPS2P61201 443 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 WASHC5Q12768 1159 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 LLGL1Q15334 1064 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 PROX2Q3B8N5 592 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 ZNF542PQ5EBM4 170 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 ARMC12Q5T9G4 340 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 NYAP1Q6ZVC0 841 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 B4GALNT4Q76KP1 1039 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 PTAR1Q7Z6K3 402 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 KIAA1524Q8TCG1 905 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 IMP4Q96G21 291 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 TRIB3Q96RU7 358 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 LYSMD1Q96S90 227 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 C1QTNF7Q9BXJ2 289 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 LRRK1Q38SD2 2015 aa16.16■□□□□ 0.18
SCAMP4-205ENST00000452128 COL5A1P20908 1838 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 SHROOM3Q8TF72 1996 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 EPG5Q9HCE0 2579 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 ASPMQ8IZT6 3477 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 A0A0J9YYE9 177 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 A0A0U1RQS6 177 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 A8MX80 341 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 CPP00450 1065 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 TRBC1P01850 177 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 KCNA4P22459 653 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 CD68P34810 354 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 HNF1BP35680 557 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 GSDMDP57764 484 aa16.15■□□□□ 0.18
SCAMP4-205ENST00000452128 RPL26P61254 145 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms