RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 DPPA4Q7L190 304 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 CNGA4Q8IV77 575 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 KDF1Q8NAX2 398 aaPredicted RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 CCNYQ8ND76 341 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 ASB12Q8WXK4 309 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 TSACCQ96A04 125 aaPredicted RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 NUDCD1Q96RS6 583 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 MGME1Q9BQP7 344 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 ZNF670Q9BS34 389 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 LRRC61Q9BV99 259 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 SLC13A1Q9BZW2 595 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 SIRPGQ9P1W8 387 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 RCOR3Q9P2K3 495 aaPredicted RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 KLQ9UEF7 1012 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 TFR2Q9UP52 801 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 DOLKQ9UPQ8 538 aa9.73□□□□□ -0.85
USP54-207ENST00000451492 ZFC3H1O60293 1989 aaKnown RBP9.73□□□□□ -0.85
USP54-207ENST00000451492 LAMA5O15230 3695 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 GOLGA4Q13439 2230 aaKnown RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 ADAMTS20P59510 1910 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 NBEAQ8NFP9 2946 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 CPED1A4D0V7 1026 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 TRABD2BA6NFA1 517 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 NEMP2A6NFY4 417 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 GCATO75600 419 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 RECQL5O94762 991 aaPredicted RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 KRT7P08729 469 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 ALPIP09923 528 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 CTSEP14091 401 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 ACP1P24666 158 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 HSPA9P38646 679 aaKnown RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 GARSP41250 739 aaKnown RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 SUOXP51687 545 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 YPEL5P62699 121 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 POLR2LP62875 67 aaKnown RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 INSM1Q01101 510 aaPredicted RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 DSC2Q02487 901 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 PPARDQ03181 441 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 CYP4F3Q08477 520 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 NSUN2Q08J23 767 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP54-207ENST00000451492 GALNT2Q10471 571 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 TARDBPQ13148 414 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP54-207ENST00000451492 NFATC4Q14934 902 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 PDK2Q15119 407 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 LLGL1Q15334 1064 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 KCTD16Q68DU8 428 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 GUSBP11Q6P575 273 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 NPNTQ6UXI9 565 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 B4GALNT4Q76KP1 1039 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 TSPAN33Q86UF1 283 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 PROSER1Q86XN7 944 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 RFX6Q8HWS3 928 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 MAP7D3Q8IWC1 876 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 PELI3Q8N2H9 469 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 IFI44Q8TCB0 444 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 HCAR2Q8TDS4 363 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 BTN2A2Q8WVV5 523 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 RAPGEF5Q92565 580 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 ECHDC3Q96DC8 303 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 NUS1Q96E22 293 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 IFT43Q96FT9 208 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 PDXPQ96GD0 296 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 DCBLD2Q96PD2 775 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 SMIM14Q96QK8 99 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 IL12RB2Q99665 862 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 SEMA3CQ99985 751 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 APOOQ9BUR5 198 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 CEP41Q9BYV8 373 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 MRPL40Q9NQ50 206 aaKnown RBP9.72□□□□□ -0.85
USP54-207ENST00000451492 SEPT10Q9P0V9 454 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 SPASTQ9UBP0 616 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 PCDHGA1Q9Y5H4 931 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 HEY1Q9Y5J3 304 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 SCN8AQ9UQD0 1980 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 IGF2RP11717 2491 aa9.72□□□□□ -0.85
USP54-207ENST00000451492 BPTFQ12830 3046 aa9.71□□□□□ -0.85
USP54-207ENST00000451492 LY6G6EA0A0G2JKS1 128 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 NPIPB15A6NHN6 443 aaPredicted RBP9.71□□□□□ -0.86
USP54-207ENST00000451492 TAF4O00268 1085 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 SPOPO43791 374 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 SOCS5O75159 536 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 HLA-DQB2P05538 268 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 ANXA6P08133 673 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 PDHA1P08559 390 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 CKMT1AP12532 417 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 TSHRP16473 764 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 GM2AP17900 193 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 CR2P20023 1033 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 LHCGRP22888 699 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 KDELR1P24390 212 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 HTR1BP28222 390 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 VIPR1P32241 457 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 MAN1A1P33908 653 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 ETV3P41162 512 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 NOP2P46087 812 aaKnown RBP9.71□□□□□ -0.86
USP54-207ENST00000451492 EPHB1P54762 984 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 MTM1Q13496 603 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 CAMK2BQ13554 666 aa9.71□□□□□ -0.86
USP54-207ENST00000451492 ARHGEF7Q14155 803 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms