RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 H3BSA7 217 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 H3BUI4 141 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 TOR1AO14656 332 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 APOL1O14791 398 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCNT2O60583 730 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SNAP91O60641 907 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 EDF1O60869 148 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 OPHN1O60890 802 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 TM7SF2O76062 418 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 DDHD2O94830 711 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 HAUS5O94927 633 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLITRK3O94933 977 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PGM3O95394 542 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 IFNA14P01570 189 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CD4P01730 458 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 UGT2B4P06133 528 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ATP5BP06576 529 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PGK2P07205 417 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SRGNP10124 158 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 FDPSP14324 419 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 HPGDP15428 266 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ITGA2P17301 1181 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ITGB5P18084 799 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ITGB6P18564 788 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ITIH1P19827 911 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CDH5P33151 784 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 TTKP33981 857 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT20P35900 424 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 FDFT1P37268 417 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 GARSP41250 739 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PIK3CBP42338 1070 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 IL12RB1P42701 662 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 BTDP43251 543 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PHKA1P46020 1223 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ASMTP46597 345 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 OR3A3P47888 321 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PIP4K2AP48426 406 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC9A3P48764 834 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 NPY2RP49146 381 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PPM1FP49593 454 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCT4P50991 539 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 BMXP51813 675 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 NDST1P52848 882 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 HSD17B7P56937 341 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAP3K7CLP57077 242 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 RPP38P78345 283 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 COG7P83436 770 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 TXNL4AP83876 142 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 DSC2Q02487 901 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ROM1Q03395 351 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 OCA2Q04671 838 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 KLRC3Q07444 240 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 DBPQ10586 325 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 FZD5Q13467 585 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 TFDP1Q14186 410 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 MFSD13AQ14CX5 517 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CDK10Q15131 360 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 STK38Q15208 465 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 DLGAP5Q15398 846 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRADDQ15628 312 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 DLG2Q15700 870 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC14A2Q15849 920 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 NFIL3Q16649 462 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SMU1Q2TAY7 513 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SUPT20HL1Q3ZLR7 823 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 YIF1BQ5BJH7 314 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 RALGPS1Q5JS13 557 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 DGKKQ5KSL6 1271 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLFN12LQ6IEE8 588 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PLEKHA7Q6IQ23 1121 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 NFRKBQ6P4R8 1299 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF574Q6ZN55 896 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PIK3AP1Q6ZUJ8 805 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 GSTA5Q7RTV2 222 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 MIER3Q7Z3K6 550 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 GPR142Q7Z601 462 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 LRRC6Q86X45 466 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF354CQ86Y25 554 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 RASGRP3Q8IV61 690 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CHERPQ8IWX8 916 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 SRBD1Q8N5C6 995 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 OR2C3Q8N628 320 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC89Q8N998 374 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF565Q8N9K5 539 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 KCNH5Q8NCM2 988 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 OR6S1Q8NH40 331 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 OR14C36Q8NHC7 312 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 NCOA7Q8NI08 942 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 NOC3LQ8WTT2 800 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF606Q8WXB4 792 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 LRTOMTQ8WZ04 291 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 LPGAT1Q92604 370 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 ESR2Q92731 530 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 CELF1Q92879 486 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 PHKBQ93100 1093 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 MARC2Q969Z3 335 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 RBM18Q96H35 190 aaKnown RBP3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 APOPT1Q96IL0 206 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 RIPOR3Q96MK2 946 aa3.66□□□□□ -1.82
HMGB3P8-201ENST00000449709 COG8Q96MW5 612 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms