RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 ADGRE3Q9BY15 652 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CPEB1Q9BZB8 566 aaKnown RBP12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 HEBP1Q9NRV9 189 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PLA2G4CQ9UP65 541 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PLXNA2O75051 1894 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 MYO10Q9HD67 2058 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 AGPSO00116 658 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 NARSO43776 548 aaKnown RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 POP4O95707 220 aaKnown RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 UGT2B4P06133 528 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PDHA1P08559 390 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SRFP11831 508 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PRKCHP24723 683 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 IL12RB1P42701 662 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 RPL26P61254 145 aaKnown RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PFKPQ01813 784 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 MSLNQ13421 630 aaPredicted RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 STAT4Q14765 748 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 EFTUD2Q15029 972 aaKnown RBP eCLIP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 QPCTQ16769 361 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 KRT71Q3SY84 523 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CEP85LQ5SZL2 805 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 BLOC1S5Q8TDH9 187 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 EPS8L3Q8TE67 593 aaKnown RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 FBF1Q8TES7 1133 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 EZH1Q92800 747 aaPredicted RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ECHDC3Q96DC8 303 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 HEPHQ9BQS7 1158 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TMEM245Q9H330 911 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 IL36AQ9UHA7 158 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 RPL26L1Q9UNX3 145 aaKnown RBP12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 WASF2Q9Y6W5 498 aa12.78□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ZCWPW2A0A1B0GU75 182 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TSPAN11A1L157 253 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 MAGEB16A2A368 324 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CCDC78A2IDD5 438 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 NPC1O15118 1278 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 C1QAP02745 245 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PIRTP0C851 137 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 HLA-EP13747 358 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ADRA1DP25100 572 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 NMBRP28336 390 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TNFRSF4P43489 277 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 GALK1P51570 392 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 EPHB1P54762 984 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TDGQ13569 410 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FRG1Q14331 258 aaKnown RBP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PON2Q15165 354 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 E2F5Q15329 346 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 LONRF1Q17RB8 773 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ANKRD20A4Q4UJ75 823 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TRMT10BQ6PF06 316 aaKnown RBP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZC3H14Q6PJT7 736 aaKnown RBP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CES3Q6UWW8 571 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 C3orf62Q6ZUJ4 267 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 GLT6D1Q7Z4J2 308 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZSWIM9Q86XI8 627 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZNF513Q8N8E2 541 aaPredicted RBP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZBTB9Q96C00 473 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CERS2Q96G23 380 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZNF641Q96N77 438 aaPredicted RBP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CYTH2Q99418 400 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SH3GL2Q99962 352 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TMEM109Q9BVC6 243 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 OSBPL1AQ9BXW6 950 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 MTG2Q9H4K7 406 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PPCSQ9HAB8 311 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FBRSL1Q9HCM7 1045 aaKnown RBP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SLC2A4RGQ9NR83 387 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CHRAC1Q9NRG0 131 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CACNA2D2Q9NY47 1150 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 HCN2Q9UL51 889 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SPO11Q9Y5K1 396 aa12.77□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ANKRD11Q6UB99 2663 aaPredicted RBP12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 A0A0J9YYE9 177 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 A0A1W2PQ67 120 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CAPN8A6NHC0 703 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FAM159BA6NKW6 160 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SMIM23A6NLE4 172 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ANKRD66B4E2M5 251 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SIN3BO75182 1162 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 LEFTY1O75610 366 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TCEA3O75764 348 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ALDH1A2O94788 518 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TRBC1P01850 177 aa12.76□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CTSLP07711 333 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms