RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ILKAPQ9H0C8 392 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 SMOXQ9NWM0 555 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 TLK1Q9UKI8 766 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 AKT3Q9Y243 479 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 PIK3R2O00459 728 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 DPYSL4O14531 572 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 MDM4O15151 490 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 SLC22A1O15245 554 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 F2P00734 622 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 ITGB3P05106 788 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 MYF6P23409 242 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 CTAG1AP78358 180 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 NT5DC4Q86YG4 428 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 RCN3Q96D15 328 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 CNDP2Q96KP4 475 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 TUBA1CQ9BQE3 449 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 ATP13A3Q9H7F0 1226 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 WDR41Q9HAD4 459 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 EIF2B3Q9NR50 452 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 BFARQ9NZS9 450 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 TJP2Q9UDY2 1190 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 TRIM64A6NGJ6 449 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 SOCS2O14508 198 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 DYRK3O43781 588 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 MICAL2O94851 1124 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 ZNF865P0CJ78 1059 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 RBL1P28749 1068 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 RBP5P82980 135 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 ZBTB6Q15916 424 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 DPP9Q86TI2 863 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 DEPDC4Q8N2C3 294 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 PLD5Q8N7P1 536 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 PPP1R16BQ96T49 567 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 NT5C1AQ9BXI3 368 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 MAGEE1Q9HCI5 957 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 GIMAP4Q9NUV9 329 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 DNAH12Q6ZR08 3092 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 PLIN3O60664 434 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 IL4RP24394 825 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 IL1R2P27930 398 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 PIK3R1P27986 724 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 NME5P56597 212 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 ALKAL1Q6UXT8 129 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 PIWIL3Q7Z3Z3 882 aaKnown RBP13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 HERC6Q8IVU3 1022 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 PGAM4Q8N0Y7 254 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 ZCCHC7Q8N3Z6 543 aaKnown RBP13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 TTC30BQ8N4P2 665 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 OR6J1Q8NGC5 347 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 OR13F1Q8NGS4 319 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 RDH11Q8TC12 318 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 OR2B2Q9GZK3 357 aa13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 GPN2Q9H9Y4 310 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-204ENST00000449372 CXorf49A8MYA2 514 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 KRT8P05787 483 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 ITIH1P19827 911 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 CDO1Q16878 200 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 RSBN1Q5VWQ0 802 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 NEK5Q6P3R8 708 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 ARMC8Q8IUR7 673 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 RP9Q8TA86 221 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 CLSTN3Q9BQT9 956 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 BEGAINQ9BUH8 593 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 EMILIN2Q9BXX0 1053 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 FANCEQ9HB96 536 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 CDHR5Q9HBB8 845 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 TCAF1Q9Y4C2 921 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 HAS3O00219 553 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 ZNF195O14628 629 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 MAN1A2O60476 641 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 DEAF1O75398 565 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 FKBP9O95302 570 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 DPP6P42658 865 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 PRKCQQ04759 706 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 KIAA0408Q6ZU52 694 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 CHSY3Q70JA7 882 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC51BQ86UW2 128 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 DCLK2Q8N568 766 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 FIG4Q92562 907 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 HTRA1Q92743 480 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 IL12RB2Q99665 862 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 EFCAB1Q9HAE3 211 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 C20orf96Q9NUD7 363 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 SUCOQ9UBS9 1254 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 GJD2Q9UKL4 321 aa13.52□□□□□ -0.25
SYNGAP1-204ENST00000449372 MTSS1O43312 755 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 ENDOD1O94919 500 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 CLIC3O95833 236 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 CYP3A5P20815 502 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 DNAJB2P25686 324 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 ADGRF2Q8IZF7 708 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 TOR1AIP2Q8NFQ8 470 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms