RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 H0YIN7 160 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 LYPLA1O75608 230 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 APOC1P02654 83 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 NR3C2P08235 984 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 WEE2P0C1S8 567 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 CLEC2LP0C7M8 214 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ZSCAN5DPP0CG00 497 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 HOXC9P31274 260 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 NKX3-2P78367 333 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 RIPPLY1Q0D2K3 151 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 MFSD10Q14728 455 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF124Q15973 351 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 GPAT3Q53EU6 434 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 MROH9Q5TGP6 573 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PIK3R6Q5UE93 754 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 RHPN2Q8IUC4 686 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 RNF135Q8IUD6 432 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 THNSL1Q8IYQ7 743 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 OFCC1Q8IZS5 231 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TCTE3Q8IZS6 198 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 RNF148Q8N7C7 305 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 GLIS1Q8NBF1 620 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 OR52H1Q8NGJ2 320 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 MSANTD3Q96H12 275 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF594Q96JF6 807 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 MAGEB10Q96LZ2 347 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 C12orf57Q99622 126 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 WDR83Q9BRX9 315 aaKnown RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 LHX5Q9H2C1 402 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 MMP27Q9H306 513 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 C8orf33Q9H7E9 229 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 NIPAL2Q9H841 368 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 MRM3Q9HC36 420 aaKnown RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 SMPD3Q9NY59 655 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TINAGQ9UJW2 476 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PCDHGA7Q9Y5G6 932 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 SH3D21A4FU49 640 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ANGPT2O15123 496 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PSTPIP1O43586 416 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 RFPL1O75677 317 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PIAS1O75925 651 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TP53P04637 393 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 KRT18P05783 430 aaKnown RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 P4HBP07237 508 aaKnown RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 RBP1P09455 135 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TRIM49P0CI25 452 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TRIM49CP0CI26 452 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 FGF3P11487 239 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 GABRB2P47870 512 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PTPN5P54829 565 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 GSTO1P78417 241 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 FLI1Q01543 452 aaPredicted RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ALCAMQ13740 583 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ADPRMQ3LIE5 342 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PRR16Q569H4 304 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 FNBP1LQ5T0N5 605 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TMEM81Q6P7N7 255 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 CATSPER4Q7RTX7 472 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TMPRSS9Q7Z410 1059 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 RAB43Q86YS6 212 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 EPHX4Q8IUS5 362 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 CNTD1Q8N815 330 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ZBTB44Q8NCP5 570 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 NDNFQ8TB73 568 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 SLC7A6Q92536 515 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ZHX1-C8orf76Q96EF9 292 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 INTS2Q9H0H0 1204 aaKnown RBP10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PNPOQ9NVS9 261 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 PGAP2Q9UHJ9 254 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 ANAPC2Q9UJX6 822 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 GMPPBQ9Y5P6 360 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 CDY2AQ9Y6F7 541 aa10.79□□□□□ -0.68
LINC00342-202ENST00000448494 TOPAZ1Q8N9V7 1692 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 USP54Q70EL1 1684 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 COL1A1P02452 1464 aaPredicted RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 TCRBV9S1A1TA0A576 114 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 A8MV72 311 aaPredicted RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 DFNA5O60443 496 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 GMDSO60547 372 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 TIPRLO75663 272 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 ADARB1P78563 741 aaKnown RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 KCNJ11Q14654 390 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 ZMYND11Q15326 602 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 MSS51Q4VC12 460 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 TIGD3Q6B0B8 471 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF517Q6ZMY9 492 aaPredicted RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 GPAT4Q86UL3 456 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 GPALPP1Q8IXQ4 340 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 FAM83FQ8NEG4 500 aaPredicted RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 OR10T2Q8NGX3 314 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 PPP1R13LQ8WUF5 828 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 DHX38Q92620 1227 aaKnown RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 DDX17Q92841 729 aaKnown RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 BIRC7Q96CA5 298 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 MMP19Q99542 508 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 ASPSCR1Q9BZE9 553 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms