RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IGF2-ASQ6U949 168 aa28.45■■■□□ 2.14
CBX4-202ENST00000448310 PCSK4Q6UW60 755 aa28.45■■■□□ 2.14
CBX4-202ENST00000448310 PAF1Q8N7H5 531 aa28.45■■■□□ 2.14
CBX4-202ENST00000448310 SCG3Q8WXD2 468 aaKnown RBP28.45■■■□□ 2.14
CBX4-202ENST00000448310 CCDC74AQ96AQ1 378 aa28.45■■■□□ 2.14
CBX4-202ENST00000448310 NSMCE3Q96MG7 304 aa28.45■■■□□ 2.14
CBX4-202ENST00000448310 WDR92Q96MX6 357 aa28.45■■■□□ 2.14
CBX4-202ENST00000448310 EIF3CQ99613 913 aaKnown RBP28.45■■■□□ 2.14
CBX4-202ENST00000448310 CNOT8Q9UFF9 292 aaKnown RBP28.45■■■□□ 2.14
CBX4-202ENST00000448310 GPR34Q9UPC5 381 aa28.45■■■□□ 2.14
CBX4-202ENST00000448310 PRPSAP2O60256 369 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 RNF8O76064 485 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 FTLP02792 175 aaPredicted RBP28.44■■■□□ 2.14
CBX4-202ENST00000448310 BCL2L1Q07817 233 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 C19orf57Q0VDD7 668 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 MTM1Q13496 603 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 ECHDC3Q96DC8 303 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.44■■■□□ 2.14
CBX4-202ENST00000448310 PCDHGA8Q9Y5G5 932 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 UNC13CQ8NB66 2214 aa28.44■■■□□ 2.14
CBX4-202ENST00000448310 HELZ2Q9BYK8 2649 aaKnown RBP28.43■■■□□ 2.14
CBX4-202ENST00000448310 A8MX80 341 aa28.43■■■□□ 2.14
CBX4-202ENST00000448310 RECQL5O94762 991 aaPredicted RBP28.43■■■□□ 2.14
CBX4-202ENST00000448310 SCNN1BP51168 640 aa28.43■■■□□ 2.14
CBX4-202ENST00000448310 IL10RBQ08334 325 aa28.43■■■□□ 2.14
CBX4-202ENST00000448310 LVRNQ6Q4G3 990 aa28.43■■■□□ 2.14
CBX4-202ENST00000448310 GKN2Q86XP6 184 aa28.43■■■□□ 2.14
CBX4-202ENST00000448310 WDR36Q8NI36 951 aaKnown RBP28.43■■■□□ 2.14
CBX4-202ENST00000448310 WDR48Q8TAF3 677 aa28.43■■■□□ 2.14
CBX4-202ENST00000448310 ZNF653Q96CK0 615 aa28.43■■■□□ 2.14
CBX4-202ENST00000448310 CWC15Q9P013 229 aaKnown RBP28.43■■■□□ 2.14
CBX4-202ENST00000448310 ATMQ13315 3056 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 TTC24A2A3L6 582 aaPredicted RBP28.42■■■□□ 2.14
CBX4-202ENST00000448310 DDX3XO00571 662 aaKnown RBP eCLIP28.42■■■□□ 2.141e-23■■□□□ 13.3
CBX4-202ENST00000448310 NTN3O00634 580 aaPredicted RBP28.42■■■□□ 2.14
CBX4-202ENST00000448310 LRCH4O75427 683 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 TNFP01375 233 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 LIPIQ6XZB0 460 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 B3GNT8Q7Z7M8 397 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 SDR16C5Q8N3Y7 309 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 ATL2Q8NHH9 583 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 FNIP1Q8TF40 1166 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 OR1E3Q8WZA6 343 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 FUBP1Q96AE4 644 aaKnown RBP28.42■■■□□ 2.14
CBX4-202ENST00000448310 MRPL40Q9NQ50 206 aaKnown RBP28.42■■■□□ 2.14
CBX4-202ENST00000448310 TMEM63CQ9P1W3 806 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 MYO1AQ9UBC5 1043 aa28.42■■■□□ 2.14
CBX4-202ENST00000448310 ARHGEF17Q96PE2 2063 aaPredicted RBP28.41■■■□□ 2.14
CBX4-202ENST00000448310 CCDC187A0A096LP49 1063 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 TMEM202A6NGA9 273 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 TNFSF15O95150 251 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 MBD3O95983 291 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 ELFN1P0C7U0 828 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 GM2AP17900 193 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 UCNP55089 124 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 CCL7P80098 99 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 DPYSQ14117 519 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 LSM14AQ8ND56 463 aaKnown RBP28.41■■■□□ 2.14
CBX4-202ENST00000448310 RBM15Q96T37 977 aaKnown RBP eCLIP28.41■■■□□ 2.143e-8■■■■■ 26.8
CBX4-202ENST00000448310 DPH1Q9BZG8 443 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 NAT10Q9H0A0 1025 aaKnown RBP28.41■■■□□ 2.14
CBX4-202ENST00000448310 FGF22Q9HCT0 170 aa28.41■■■□□ 2.14
CBX4-202ENST00000448310 CFAP46Q8IYW2 2715 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 CFAP69A5D8W1 941 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 CDRT15L2A8MXV6 281 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 TRAFD1O14545 582 aaPredicted RBP28.4■■■□□ 2.14
CBX4-202ENST00000448310 GZMAP12544 262 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 NSUN2Q08J23 767 aaKnown RBP eCLIP28.4■■■□□ 2.14
CBX4-202ENST00000448310 SLC10A7Q0GE19 358 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 RFTN1Q14699 578 aaPredicted RBP28.4■■■□□ 2.14
CBX4-202ENST00000448310 DPPA4Q7L190 304 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 SFTPA2Q8IWL1 248 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 PELI3Q8N2H9 469 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 FOXP3Q9BZS1 431 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 EPB41L5Q9HCM4 733 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 AIPL1Q9NZN9 384 aa28.4■■■□□ 2.14
CBX4-202ENST00000448310 CACNB4O00305 520 aaPredicted RBP28.39■■■□□ 2.14
CBX4-202ENST00000448310 RPLP0P05388 317 aaKnown RBP28.39■■■□□ 2.14
CBX4-202ENST00000448310 SKILP12757 684 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 TCF4P15884 667 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 PRKCIP41743 596 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 KIAA1024LP59773 190 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 SKOR1P84550 965 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 KLHL30Q0D2K2 578 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 LBRQ14739 615 aaKnown RBP28.39■■■□□ 2.14
CBX4-202ENST00000448310 SMTNL2Q2TAL5 461 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 PSTKQ8IV42 348 aaKnown RBP28.39■■■□□ 2.14
CBX4-202ENST00000448310 ARL14Q8N4G2 192 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 OR56A4Q8NGH8 313 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 PSKH2Q96QS6 385 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 GFM1Q96RP9 751 aaKnown RBP28.39■■■□□ 2.14
CBX4-202ENST00000448310 SEPT3Q9UH03 358 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 DGKBQ9Y6T7 804 aa28.39■■■□□ 2.14
CBX4-202ENST00000448310 A0A1W2PQM1 296 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 IL1R2P27930 398 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 HCAR3P49019 387 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 AP1S1P61966 158 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 POLR2LP62875 67 aaKnown RBP28.38■■■□□ 2.13
CBX4-202ENST00000448310 ACOX1Q15067 660 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 FILIP1LQ4L180 1135 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms