RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 DDX3YO15523 660 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 OR10H3O60404 316 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 LINC00032P0C843 101 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 EPORP19235 508 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MYL9P24844 172 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MSX2P35548 267 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 NEK5Q6P3R8 708 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CXXC5Q7LFL8 322 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 OR5B17Q8NGF7 314 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ELMO1Q92556 727 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 HPS1Q92902 700 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 OR52E6Q96RD3 313 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 GAD1Q99259 594 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CIB1Q99828 191 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 FAIM2Q9BWQ8 316 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 DENND2DQ9H6A0 471 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 UXTQ9UBK9 157 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CDH22Q9UJ99 828 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 R3HDM2Q9Y2K5 976 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 A0A0J9YYE9 177 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 A8MX80 341 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 G3V2T6 193 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 AREL1O15033 823 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ZBTB11O95625 1053 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CHRNGP07510 517 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 BMP7P18075 431 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 S100A1P23297 94 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ATP5C1P36542 298 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CCR4P51679 360 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ABATP80404 500 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SPIBQ01892 262 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MTAPQ13126 283 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MFSD10Q14728 455 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 NOMO1Q15155 1222 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 C5orf22Q49AR2 442 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SLC25A24Q6NUK1 477 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 TRIM40Q6P9F5 258 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PLET1Q6UQ28 207 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 DSG4Q86SJ6 1040 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SLC16A10Q8TF71 515 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 KLHL32Q96NJ5 620 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 HSD17B14Q9BPX1 270 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ZYG11BQ9C0D3 744 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 RACGAP1Q9H0H5 632 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PCDH12Q9NPG4 1184 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 RPTORQ8N122 1335 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 ADAMTS13Q76LX8 1427 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 EME2A4GXA9 379 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 DPPA5A6NC42 116 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 LOC110117498-PIK3R3F6TDL0 507 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 SUV39H1O43463 412 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 NR2F1P10589 423 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 COL6A2P12110 1019 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 UBA1P22314 1058 aaKnown RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 MATKP42679 507 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 CXCL9Q07325 125 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 EML3Q32P44 896 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 EGFLAMQ63HQ2 1017 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 RAP1GAP2Q684P5 730 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 BICRALQ6AI39 1079 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 C16orf59Q7L2K0 433 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 C12orf56Q8IXR9 622 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 SPATA6LQ8N4H0 392 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF557Q8N988 423 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 ARRDC4Q8NCT1 418 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 RNASE11Q8TAA1 199 aaKnown RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 SLC47A1Q96FL8 570 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 YME1L1Q96TA2 773 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 CDT1Q9H211 546 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 DPP7Q9UHL4 492 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 OGDHLQ9ULD0 1010 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 VPS4AQ9UN37 437 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 ROBO3Q96MS0 1386 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 CXCL11O14625 94 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 PGRMC2O15173 223 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 MTA2O94776 668 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 FARP2O94887 1054 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 HOXC6P09630 235 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 MPSTP25325 297 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 TGFBR2P37173 567 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 CPSF6Q16630 551 aaKnown RBP eCLIP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 CRTC3Q6UUV7 619 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 FAM220AQ7Z4H9 259 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 OR2T34Q8NGX1 318 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 OR2T3Q8NH03 318 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 HDAC10Q969S8 669 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 P2RY11Q96G91 374 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 BTBD9Q96Q07 612 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 TEFMQ96QE5 360 aaKnown RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 OSBPL7Q9BZF2 842 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 PCDH18Q9HCL0 1135 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 SPG21Q9NZD8 308 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 UBIAD1Q9Y5Z9 338 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 MROH2AA6NES4 1674 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 SMIM22K7EJ46 135 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 TFECO14948 347 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 MGRN1O60291 552 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 PLOD3O60568 738 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms