RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 HACE1Q8IYU2 909 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 NATD1Q8N6N6 113 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 KCTD6Q8NC69 237 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 DPF3Q92784 378 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 SPATA17Q96L03 361 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 DNAI2Q9GZS0 605 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 SPATC1LQ9H0A9 340 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 TXNRD2Q9NNW7 524 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 A0A0G2JMZ2 1700 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 PTPRJQ12913 1337 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 DHRS12A0PJE2 317 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 HAT1O14929 419 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 LRCH4O75427 683 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 CCNKO75909 580 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 MYCP01106 439 aaPredicted RBP19.28■□□□□ 0.68
HMGA1-205ENST00000447654 TFEBP19484 476 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 PSMA4P25789 261 aaKnown RBP19.28■□□□□ 0.68
HMGA1-205ENST00000447654 ALDH7A1P49419 539 aaKnown RBP19.28■□□□□ 0.68
HMGA1-205ENST00000447654 ZBTB41Q5SVQ8 909 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 ZCCHC8Q6NZY4 707 aaKnown RBP19.28■□□□□ 0.68
HMGA1-205ENST00000447654 PRSS48Q7RTY5 328 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 RIOX2Q8IUF8 465 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 ANKRD52Q8NB46 1076 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 TMEM35BQ8NCS4 154 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF560Q96MR9 790 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 AIFM2Q9BRQ8 373 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 SYT17Q9BSW7 474 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 TBC1D13Q9NVG8 400 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 DGKBQ9Y6T7 804 aa19.28■□□□□ 0.68
HMGA1-205ENST00000447654 IGKV6D-21A0A0A0MT36 114 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 BCLAF3A2AJT9 711 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 CCRL2O00421 344 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 NEMP1O14524 444 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 TNPO2O14787 897 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 POLR1CO15160 346 aaPredicted RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 MPOP05164 745 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 GPIP06744 558 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 APRTP07741 180 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 CLCQ05315 142 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF484Q5JVG2 852 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 UBE2UQ5VVX9 321 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 LRRC8EQ6NSJ5 796 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 TMEM270Q6UE05 265 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 PIWIL3Q7Z3Z3 882 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 LYSMD2Q8IV50 215 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 OFCC1Q8IZS5 231 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 SPARTQ8N0X7 666 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 GPD1LQ8N335 351 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 SHCBP1Q8NEM2 672 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 HDAC2Q92769 488 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 UBXN10Q96LJ8 280 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 GATA5Q9BWX5 397 aaPredicted RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 LRRC40Q9H9A6 602 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 OXSMQ9NWU1 459 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 WARS2Q9UGM6 360 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF639Q9UID6 485 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 TRPC5OSA6NMA1 111 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 RAD51BO15315 384 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 DAB1O75553 588 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 ENDOD1O94919 500 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 PGK2P07205 417 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 MLNP12872 115 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 EDNRBP24530 442 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 CDH5P33151 784 aaPredicted RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 ACOT2P49753 483 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 ATN1P54259 1190 aaPredicted RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 BNIP2Q12982 314 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 LY6KQ17RY6 165 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 CYP2R1Q6VVX0 501 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 SVOPQ8N4V2 548 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 PCDH20Q8N6Y1 951 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 OR7A2PQ8NGA2 310 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF606Q8WXB4 792 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 APBA2Q99767 749 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 HPS4Q9NQG7 708 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 ADARB2Q9NS39 739 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 INTS10Q9NVR2 710 aaKnown RBP19.27■□□□□ 0.68
HMGA1-205ENST00000447654 SPEF1Q9Y4P9 236 aa19.27■□□□□ 0.68
HMGA1-205ENST00000447654 H7C0C1 242 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 M0R3G1 203 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 PIK3R2O00459 728 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 SRP72O76094 671 aaKnown RBP19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ARIH2O95376 493 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 IL1R2P27930 398 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ATP5OP48047 213 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ZNF132P52740 706 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ZACNQ401N2 412 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 PAGE2BQ5JRK9 111 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 GLRA4Q5JXX5 417 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 GRTP1Q5TC63 336 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 AGAP6Q5VW22 663 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 REP15Q6BDI9 236 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ZNF544Q6NX49 715 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ZNF534Q76KX8 674 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 CDR2LQ86X02 465 aaPredicted RBP19.26■□□□□ 0.67
HMGA1-205ENST00000447654 DDIASQ8IXT1 998 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ZNF784Q8NCA9 323 aaPredicted RBP19.26■□□□□ 0.67
HMGA1-205ENST00000447654 AGAP4Q96P64 663 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 COQ7Q99807 217 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 NAT9Q9BTE0 207 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms